New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1026771 = | 65 (1.330) | 4 (0.090) | 4/252 | NT | 6.1% | coding (197/1593 nt) | dppA‑II | dipeptide ABC transporter substrate‑binding protein |
? | NC_002947 | 1026798 = | 60 (1.280) | coding (170/1593 nt) | dppA‑II | dipeptide ABC transporter substrate‑binding protein |
TCAGCCAATCCCCGGTCCTGCTCGCCAACAACCTAGTGTTCTGCTCTGAAGGTAGCCCCGCCGGTTTCGACACCGCCCAGTACACCAGCGCCACCGACAACGACGCCGCCGAACCCATCTACAACCGCCTGGTCGAGTTCGAACGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1026921‑1026771 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggTTGTAGATGGGTTCGGCGGCGTCGTTGTCGGTGGCGCTGGTGTACTGGGCGGTGTCGAAACCGGCGGGGCTACCTTCAGAGCAGAACACTAGGTTGTTGGCGAGCAGGACCGGGGATTGGCTGACCAGGCCCAGGGCCAGCAGCGCG > NC_002947/1026798‑1026944 TCAGCCAATCCCCGGTCCTGCTCGCCAACAACCTAGTGTTCTGCTCTGAAGGTAGCCCCGCCGGTTTCGACACCGCCCAGTACACCAGCGCCACCGACAACGACGCCGCCGAACCCATCTACAACCGCCTGGTCGAGTTCGAACGTGGC > 1:201443/1‑149 TCAGCCAATCCCCGGTCCTGCTCGCCAACAACCTAGTGTTCTGCTCTGAAGGTAGCCCCGCCGGTTTCGACACCGCCCAGTACACCAGCGCCACCGACAACGACGCCGCCGAACCCATCTACAACCGCCTGGTCGAGTTCGAACGTGGC > 7:190638/1‑149 AGCCAATCCCCGGTCCTGCTCGCCAACAACCTAGTGTTCTGCTCTGAAGGTAGCCCCGCCGGTTTCGACACCGCCCAGTACACCAGCGCCACCGACAACGACGCCGCCGAACCCATCTACAACCGCCTGGTCGAGTTCGAACGTGGCGG > 1:156310/1‑149 CATCTACAACCGCCTGGTCGAGTTCGAACGTGGCGGTTGTAGATGGGTTCGGCGGCGTCGTTGTCGGTGGCGCTGGTGTACTGGGCGGTGTCGAAACCGGCGGGGCTACCTTCAGAGCAGAACACTAGGTTGTTGGCGAGCAG < 7:95355/143‑1 CATCTACAACCGCCTGGTCGAGTTCGAACGTGGCGGTTGTAGATGGGTTCGGCGGCGTCGTTGTCGGTGGCGCTGGTGTACTGGGCGGTGTCGAAACCGGCGGGGCTACCTTCAGAGCAGAACACTAGGTTGTTGGCGAGCAG > 8:95355/1‑143 TCTACAACCGCCTGGTCGAGTTCGAACGTGGCGGTTGTAGATGGGTTCGGCGGCGTCGTTGTCGGTGGCGCTGGTGTACTGGGCGGTGTCGAAACCGGCGGGGCTACCTTCAGAGCAGAACACTAGGTTGTT < 7:168580/132‑1 TCTACAACCGCCTGGTCGAGTTCGAACGTGGCGGTTGTAGATGGGTTCGGCGGCGTCGTTGTCGGTGGCGCTGGTGTACTGGGCGGTGTCGAAACCGGCGGGGCTACCTTCAGAGCAGAACACTAGGTTGTT > 8:168580/1‑132 GTTGTAGATGGGTTCGGCGGCGTCGTTGTCGGTGGCGCTGGTGTACTGGGCGGTGTCGAAACCGGCGGGGCTACCTTCAGAGCAGAACACTAGGTTGTTGGCGAGCAGGACCGGGGATTGGCTGACCAGGCCCAGGGCCAGCAGCGCG > 6:125626/1‑148 TCAGCCAATCCCCGGTCCTGCTCGCCAACAACCTAGTGTTCTGCTCTGAAGGTAGCCCCGCCGGTTTCGACACCGCCCAGTACACCAGCGCCACCGACAACGACGCCGCCGAACCCATCTACAACCGCCTGGTCGAGTTCGAACGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1026921‑1026771 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggTTGTAGATGGGTTCGGCGGCGTCGTTGTCGGTGGCGCTGGTGTACTGGGCGGTGTCGAAACCGGCGGGGCTACCTTCAGAGCAGAACACTAGGTTGTTGGCGAGCAGGACCGGGGATTGGCTGACCAGGCCCAGGGCCAGCAGCGCG > NC_002947/1026798‑1026944 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |