| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1026771 = | 65 (1.330) | 4 (0.090) | 4/252 | NT | 6.1% | coding (197/1593 nt) | dppA‑II | dipeptide ABC transporter substrate‑binding protein |
| ? | NC_002947 | 1026798 = | 60 (1.280) | coding (170/1593 nt) | dppA‑II | dipeptide ABC transporter substrate‑binding protein | |||||
TCAGCCAATCCCCGGTCCTGCTCGCCAACAACCTAGTGTTCTGCTCTGAAGGTAGCCCCGCCGGTTTCGACACCGCCCAGTACACCAGCGCCACCGACAACGACGCCGCCGAACCCATCTACAACCGCCTGGTCGAGTTCGAACGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1026921‑1026771‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggTTGTAGATGGGTTCGGCGGCGTCGTTGTCGGTGGCGCTGGTGTACTGGGCGGTGTCGAAACCGGCGGGGCTACCTTCAGAGCAGAACACTAGGTTGTTGGCGAGCAGGACCGGGGATTGGCTGACCAGGCCCAGGGCCAGCAGCGCG > NC_002947/1026798‑1026944 TCAGCCAATCCCCGGTCCTGCTCGCCAACAACCTAGTGTTCTGCTCTGAAGGTAGCCCCGCCGGTTTCGACACCGCCCAGTACACCAGCGCCACCGACAACGACGCCGCCGAACCCATCTACAACCGCCTGGTCGAGTTCGAACGTGGC > 1:201443/1‑149TCAGCCAATCCCCGGTCCTGCTCGCCAACAACCTAGTGTTCTGCTCTGAAGGTAGCCCCGCCGGTTTCGACACCGCCCAGTACACCAGCGCCACCGACAACGACGCCGCCGAACCCATCTACAACCGCCTGGTCGAGTTCGAACGTGGC > 7:190638/1‑149 AGCCAATCCCCGGTCCTGCTCGCCAACAACCTAGTGTTCTGCTCTGAAGGTAGCCCCGCCGGTTTCGACACCGCCCAGTACACCAGCGCCACCGACAACGACGCCGCCGAACCCATCTACAACCGCCTGGTCGAGTTCGAACGTGGCGG > 1:156310/1‑149 CATCTACAACCGCCTGGTCGAGTTCGAACGTGGCGGTTGTAGATGGGTTCGGCGGCGTCGTTGTCGGTGGCGCTGGTGTACTGGGCGGTGTCGAAACCGGCGGGGCTACCTTCAGAGCAGAACACTAGGTTGTTGGCGAGCAG < 7:95355/143‑1 CATCTACAACCGCCTGGTCGAGTTCGAACGTGGCGGTTGTAGATGGGTTCGGCGGCGTCGTTGTCGGTGGCGCTGGTGTACTGGGCGGTGTCGAAACCGGCGGGGCTACCTTCAGAGCAGAACACTAGGTTGTTGGCGAGCAG > 8:95355/1‑143 TCTACAACCGCCTGGTCGAGTTCGAACGTGGCGGTTGTAGATGGGTTCGGCGGCGTCGTTGTCGGTGGCGCTGGTGTACTGGGCGGTGTCGAAACCGGCGGGGCTACCTTCAGAGCAGAACACTAGGTTGTT < 7:168580/132‑1 TCTACAACCGCCTGGTCGAGTTCGAACGTGGCGGTTGTAGATGGGTTCGGCGGCGTCGTTGTCGGTGGCGCTGGTGTACTGGGCGGTGTCGAAACCGGCGGGGCTACCTTCAGAGCAGAACACTAGGTTGTT > 8:168580/1‑132 GTTGTAGATGGGTTCGGCGGCGTCGTTGTCGGTGGCGCTGGTGTACTGGGCGGTGTCGAAACCGGCGGGGCTACCTTCAGAGCAGAACACTAGGTTGTTGGCGAGCAGGACCGGGGATTGGCTGACCAGGCCCAGGGCCAGCAGCGCG > 6:125626/1‑148 TCAGCCAATCCCCGGTCCTGCTCGCCAACAACCTAGTGTTCTGCTCTGAAGGTAGCCCCGCCGGTTTCGACACCGCCCAGTACACCAGCGCCACCGACAACGACGCCGCCGAACCCATCTACAACCGCCTGGTCGAGTTCGAACGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1026921‑1026771‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggTTGTAGATGGGTTCGGCGGCGTCGTTGTCGGTGGCGCTGGTGTACTGGGCGGTGTCGAAACCGGCGGGGCTACCTTCAGAGCAGAACACTAGGTTGTTGGCGAGCAGGACCGGGGATTGGCTGACCAGGCCCAGGGCCAGCAGCGCG > NC_002947/1026798‑1026944 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |