| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1338743 = | 57 (1.170) | 3 (0.070) | 3/244 | NT | 5.2% | coding (1459/2037 nt) | PP_1163 | FAD‑binding oxidoreductase |
| ? | NC_002947 | 1338789 = | 56 (1.230) | coding (1505/2037 nt) | PP_1163 | FAD‑binding oxidoreductase | |||||
CCACACAGGTAGAAATCGTAGTCGTCCAACGCCAGCGTTGCCTTGACCTGTTCGATACCCAACCGGCCGGCAAACTCGTAATCACGACCGACCTGCGCGTGCCCTTCAGGCTGGCTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1338894‑1338743‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcctgAAGGGCACGCGCAGGTCGGTCGTGATTACGAGTTTGCCGGCC‑‑GGTTGGGTATCGAACAGGTCAAGGCAACGCTGGCGTTGGACGACTACGATTTCTACCTGTGTGGCCCGGGCAGCTTCACCCAGCAGCTTTACGAAGGGCTGCGTG > NC_002947/1338789‑1338935 CCACACAGGTAGAAATCGTAGTCGTCCAACGCCAGCGTTGCCTTGACCTGTTCGATACCCAACCGGCCGGCAAACTCGTAATCACGACCGACCTGCGCGTGCCCTTCAGGCTGGCTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGC > 3:198655/1‑149CCACACAGGTAGAAATCGTAGTCGTCCAACGCCAGCGTTGCCTTGACCTGTTCGATACCCAACCGGCCGGCAAACTCGTAATCACGACCGACCTGCGCGTGCCCTTCAGGCTGGCTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGC < 7:44537/149‑1CCACACAGGTAGAAATCGTAGTCGTCCAACGCCAGCGTTGCCTTGACCTGTTCGATACCCAACCGGCCGGCAAACTCGTAATCACGACCGACCTGCGCGTGCCCTTCAGGCTGGCTCAGTGCGCGGTGTACCTGCAGTAGATCACCAGC < 8:9740/149‑1 ACACAGGTAGAAATCGTAGTCGTCCAACGCCAGCGTTGCCTTGACCTGTTCGATACCCAACCGGCCGGCAAACTCGTAATCACGACCGACCTGCGCGTGCCCTTCAGGCTGGCTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGCCT > 1:121929/1‑149 AGGCTGGCTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGCCTGAAGGGCACGCGCAGGTCGGTCGTGATTACGAGTTTGCCGGCC‑‑GGTTGGGTATCGAACAGGTCAAGGCAACGCTGGCGTTGGACGACTACGATTTCTACCTGTGT > 3:120007/1‑149 GCTGGCTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGCCTGAAGGGCACGCGCAGGTCGGTCGTGATTACGAGTTTGCCGGCC‑‑GGTTGGGTATCGAACAGGTCAAGGCAACGCTGGC < 7:207797/119‑1 GCTGGCTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGCCTGAAGGGCACGCGCAGGTCGGTCGTGATTACGAGTTTGCCGGCC‑‑GGTTGGGTATCGAACAGGTCAAGGCAACGCTGGC > 8:207797/1‑119 CCAGCCTGAAGGGCACGCGCAGGTCGGTCGTGATTACGAGTTTGCCGGCC‑‑GGTTGGGTATCGAACAGGTCAAGGCAACGCTGGCGTTGGACGACTACGATTTCTACCTGTGTGGCCCGGGCAGCTTCACCCAGCAGCTTTACGAAGGGC > 4:195595/1‑149 CCAGCCTGAAGGGCACGCGCAGGTCGGTCGTGATCACGAGTTTGCCGGCCGGGGTTGGGTATCGAACAGGTCAAGGCAACGCTGGCGTTGGACGACTACGATTTCTACCTGTGTGGCCCGGGCAGCTTCACCCAGCAGCTTTACGAAGG > 1:75759/1‑149 CAGCCTGAAGGGCACGCGCAGGTCGGTCGTGATTACGAGTTTGCCGGCC‑‑GGTTGGGTATCGAACAGGTCAAGGCAACGCTGGCGTTGGACGACTACGATTTCTACCTGTGTGGCCCGGGCAGCTTCACCCAGCAGCTTTACGAAGGGCT > 5:281160/1‑149 CAGCCTGAAGGGCACGCGCAGGTCGGTCGTGATTACGAGTTTGCCGGCC‑‑GGTTGGGTATCGAACAGGTCAAGGCAACGCTGGCGTTGGACGACTACGATTTCTACCTGTGTGGCCCGGGCAGCTTCACCCAGCAGCTTTACGAAGGGCT > 7:245981/1‑149 GCCTGAAGGGCACGCGCAGGTCGGTCGTGATTACGAGTTTGCCGGCA‑‑GGTTGGGGATCGAACAGTTCAAGGCAACGCTGGCGTTGGACGACTACGATTTCTACCTGTGTTGCCCGGGCAGCTTCACCCAGCAGCTTTACGAAGGGCTGC < 7:257346/149‑1 CCTGAAGGGCACGCGCAGGTCGGTCGTGATTACGAGTTTGCCGGCC‑‑GGTTGGGTATCGAACAGGTCAAGGCAACGCTGGCGTTGGACGACTACGATTTCTACCTGTGTGGCCCGGGCAGCTTCACCCAGCAGCTTTACGAAGGGCTGCG > 5:189916/1‑149 TGAAGGGCACGCGCAGGTCGGTCGTGATTACGAGTTTGCCGGCC‑‑GGTTGGGTATCGAACAGGTCAAGGCAACGCTGGCGTTGGACGACTACGATTTCTACCTGTGTGGCCCGGGCAGCTTCACCCAGCAGCTTTACGAAGGGCTGCGTG > 2:32937/1‑149 TGAAGGGCACGCGCAGGTCGGTCGTGATTACGAGTTTGCCGGCC‑‑GGTTGGGTATCGAACAGGTCAAGGCAACGCTGGCGTTGGACGACTACGATTTCTACCTGTGTGGCCCGGGCAGCTTCACC > 5:304798/1‑124 TGAAGGGCACGCGCAGGTCGGTCGTGATTACGAGTTTGCCGGCC‑‑GGTTGGGTATCGAACAGGTCAAGGCAACGCTGGCGTTGGACGACTACGATTTCTACCTGTGTGGCCCGGGCAGCTTCACC < 6:304798/124‑1 CCACACAGGTAGAAATCGTAGTCGTCCAACGCCAGCGTTGCCTTGACCTGTTCGATACCCAACCGGCCGGCAAACTCGTAATCACGACCGACCTGCGCGTGCCCTTCAGGCTGGCTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1338894‑1338743‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcctgAAGGGCACGCGCAGGTCGGTCGTGATTACGAGTTTGCCGGCC‑‑GGTTGGGTATCGAACAGGTCAAGGCAACGCTGGCGTTGGACGACTACGATTTCTACCTGTGTGGCCCGGGCAGCTTCACCCAGCAGCTTTACGAAGGGCTGCGTG > NC_002947/1338789‑1338935 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |