| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1341964 = | 58 (1.190) | 4 (0.090) | 4/252 | NT | 5.8% | coding (253/924 nt) | PP_1166 | DMT superfamily permease |
| ? | NC_002947 | 1342041 = | 73 (1.550) | coding (176/924 nt) | PP_1166 | DMT superfamily permease | |||||
GCGCATCGCCTTCGATGACGGCACCGGCGTGCTGCTGGCGATTCTCTGCCGCTCAGGCATCACGTTCCTGGTACTGGCCGGGCTGCTGCTGTGGCAACGCCAGGCCCTGGCCCTGCCCGCCGGTGCGCGCCGGTGGCAGCTGCTGCTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1342115‑1341964‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccAGTACCAGGAACGTGATGCCTGAGCGGCAGAGAATCGCCAGCAGCACGCCGGTGCCGTCATCGAAGGCGATGCGCGCGGCGATGTGGTTGCCAGCGAATGAACAGGCCAGGAGGGCGAGCAGGGCGAT > NC_002947/1342041‑1342168 GCGCATCGCCTTCGATGACGGCACCGGCGTGCTGCTGGCGATTCTCTGCCGCTCAGGCATCACGTTCCTGGTACTGGCCGGGCTGCTGCTGTGGCAACGCCAGGCCCTGGCCCTGCCCGCCGGTGCGCGCCGGTGGCAGCTGCTGCTCG < 6:285872/149‑1 GCATCGCCTTCGATGACGGCACCGGCGTGCTGCTGGCGATTCTCTGCCGCTCAGGCATCACGTTCCTGGTACTGGCCGGGCTGCTGCTGTGGCAACGCCAGGCCCTGGCCCTGCCCGCCGGTGCGCGCCGGTGGCAGCTGCTGCTCGGC < 2:263491/149‑1 ATCGCCTTCGATGACGGCACCGGCGTGCTGCTGGCGATTCTCTGCCGCTCAGGCATCACGTTCCTTGTACTGGCCGGGCTGCTGCTGTGGCAACGCCAGGCCCTGGCCCTGCCCGCCGGTGCGCGCCGGTGGCAGCTGCTGCTCGGCC < 6:275983/148‑1 GTACTGGCCGGGCTGCTGCTGTGGCAACGCCAGGCCCTGGCCCTGCCCGCCGGTGCGCGCCGGTGGCAGCTGCTGCTCGGCCAGTACCAGGAACGTGATGCCTGAGCGGCAGAGAATCGCCAGCAGCACGCCGGTGCCGTCATCGAAGG > 8:231684/1‑149 GCTGCTGCTGTGGCAACGCCAGGCCCTGGCCCTGCCCGCCGGTGCGCGCCGGTGGCAGCTGCTGCTCGGCCAGTACCAGGAACGTGATGCCTGAGCGGCAGAGAATCGCCAGCAGCACGCCGGTGCCGTCATCGAAGGCGATGCGCGCG > 4:120720/1‑149 CAACGCCAGGCCCTGGCCCTGCCCGCCGGTGCGCGCCGGTGGCAGCTGCTGCTCGGCCAGTACCAGGAACGTGATGCCTGAGCGGCAGAGAATCGCCAGCAGCACGCCGGTGCCGTCATCGAAGGCGATGCGCGCGGCGATGTGGTTGC < 3:120720/149‑1 CCGGTGCGCGCCGGTGGCAGCTGCTGCTCGGCCAGTACCAGGAACGTGATGCCTGAGCGGCAGAGAATCGCCAGCAGCACGCCGGTGCCGTCATCGAAGGCGATGCGCGCGGCGATGTGGTTGCCAGCGAATGAACAGGCCAGGAGGGC < 7:231684/149‑1 GGCCAGTACCAGGAACGTGATGCCTGAGCGGCAGAGAATCGCCAGCAGCACGCCGGTGCCGTCATCGAAGGCGATGCGCGCGGCGATGTGGTTGCCAGCGAATGAACAGGCCAGGAGGGCGAGCAGGGCGAT > 7:129910/1‑132 GGCCAGTACCAGGAACGTGATGCCTGAGCGGCAGAGAATCGCCAGCAGCACGCCGGTGCCGTCATCGAAGGCGATGCGCGCGGCGATGTGGTTGCCAGCGAATGAACAGGCCAGGAGGGCGAGCAGGGCGAT < 8:129910/132‑1 GCGCATCGCCTTCGATGACGGCACCGGCGTGCTGCTGGCGATTCTCTGCCGCTCAGGCATCACGTTCCTGGTACTGGCCGGGCTGCTGCTGTGGCAACGCCAGGCCCTGGCCCTGCCCGCCGGTGCGCGCCGGTGGCAGCTGCTGCTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1342115‑1341964‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccAGTACCAGGAACGTGATGCCTGAGCGGCAGAGAATCGCCAGCAGCACGCCGGTGCCGTCATCGAAGGCGATGCGCGCGGCGATGTGGTTGCCAGCGAATGAACAGGCCAGGAGGGCGAGCAGGGCGAT > NC_002947/1342041‑1342168 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |