New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1354380	54 (1.100)	3 (0.070)	3/246	NT	5.4%	coding (997/2880 nt)	nrdA	ribonucleoside‑diphosphate reductase subunit alpha
	?	NC_002947	= 1354407	54 (1.180)					coding (970/2880 nt)	nrdA	ribonucleoside‑diphosphate reductase subunit alpha

CCCGACAGGTCGTCCGGCACGGTGGTCAGGTAGCAGCTGGACAGCTGCGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1354226‑1354380 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttcttcATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCGCCCGCAGCTGTCCAGC  <  NC_002947/1354407‑1354261                                                                                                                                                                                                                                                                                                                CCCGACAGGTCGTCCGGCACGGTGGTCAGGTAGCAGCTGGACAGCTGCGGGCGCAGGGTGCCGGCGGTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTT                                                                                                                                                           <  5:258552/149‑1  CCGACAGGTCGTCCGGCACGGTGGTCAGGTAGCAGCTGGACAGCTGCGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTT                                                                                                                                                          >  1:284421/1‑149    GACAGGTCGTCCGGCACGGTGGTCAGGTAGCAGCTGGACAGCTGCGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTC                                                                                                                                                        <  5:249717/149‑1         GTCGTCCGGCACGGTGGTCAGGTAGCAGCTGGACAGCTGCGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTCTTC                                                                                                                                                     >  5:192580/1‑147         GTCGTCCGGCACGGTGGTCAGGTAGCAGCTGGACAGCTGCGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTCTTC                                                                                                                                                     >  6:3865/1‑147         GTCGTCCGGCACGGTGGTCAGGTAGCAGCTGGACAGCTGCGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTCTTC                                                                                                                                                     >  6:77818/1‑147                                    GCTGGACAGCTGCGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTT                                                                                                                                                         <  3:8181/116‑1                                    GCTGGACAGCTGCGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTT                                                                                                                                                         >  4:8181/1‑116                                                CGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAA                                                                                                            <  2:3119/149‑1                                                                     GAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGG                                                                                                                         >  5:257956/1‑115                                                                     GAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGG                                                                                                                         <  6:257956/115‑1                                                                                                                                                       TCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCGCCCGCAGCTGTC      <  8:77764/148‑1                                                                                                                                                        CTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCGCCCGCAGCTGTCC     <  7:160421/148‑1                                                                                                                                                         TTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCGCCCGCAGCTGTCCAG   >  7:151660/1‑149                                                                                                                                                         TTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCGCCCGCAGCTGTCCAG   >  7:155926/1‑149                                                                                                                                                           CATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCGCCCGCAGCTGTCCAGC  <  3:147312/148‑1                                                                                                                                                                                                                                                                                                                CCCGACAGGTCGTCCGGCACGGTGGTCAGGTAGCAGCTGGACAGCTGCGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1354226‑1354380 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttcttcATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCGCCCGCAGCTGTCCAGC  <  NC_002947/1354407‑1354261

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.