| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1364739 | 61 (1.250) | 4 (0.080) +C |
4/260 | NT | 6.5% | intergenic (+109/+40) | dctA‑I/PP_1189 | C4‑dicarboxylate transport protein/hypothetical protein |
| ? | NC_002947 | 6052500 = | 55 (1.120) | intergenic (+61/+109) | PP_5304/PP_5305 | lipoprotein/epimerase/dehydratase‑like protein | |||||
CTTTTTCGTGTTAGCGCGGACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1364667‑1364739‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCA > NC_002947/6052500‑6052538 | CTTTTTCGTGTTAGCGCGGACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGGCTGAGGGCCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCA > 6:21404/1‑113CTTTTTCGTGTTAGCGCGGACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTCGCGCGATTGGGCTGAGGGCCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCA < 5:21404/113‑1 ACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGAGGGCCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCC > 1:12301/1‑92 ACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGAGGGCCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCC < 2:12301/92‑1 | CTTTTTCGTGTTAGCGCGGACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1364667‑1364739‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCA > NC_002947/6052500‑6052538 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |