| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1447785 = | 63 (1.290) | 5 (0.110) | 5/252 | NT | 7.3% | coding (1883/2178 nt) | PP_1264 | fusaric acid resistance protein |
| ? | NC_002947 | 1447829 = | 67 (1.420) | coding (1927/2178 nt) | PP_1264 | fusaric acid resistance protein | |||||
GACACGGATTGCCTGGCGCCACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1447843‑1447785‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGACACC > NC_002947/1447829‑1447975 GACACGGATTGCCTGGCGCCACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTC < 5:248599/101‑1GACACGGATTGCCTGGCGCCACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTC > 6:248599/1‑101 CACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTG > 8:146458/1‑148 GCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGC > 5:105369/1‑149 GGGTGCACCGGGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCC < 7:146458/149‑1 ttGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGA < 7:42544/147‑1 GGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGA > 7:187522/1‑148 GCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGACAC > 8:123944/1‑148 GCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTACTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGACACC > 5:288377/1‑149 GACACGGATTGCCTGGCGCCACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1447843‑1447785‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGACACC > NC_002947/1447829‑1447975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |