| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1467322 | 54 (1.100) | 3 (0.060) | 3/254 | NT | 5.4% | coding (1370/1479 nt) | algE | alginate production protein AlgE |
| ? | NC_002947 | = 1467356 | 52 (1.100) | coding (1336/1479 nt) | algE | alginate production protein AlgE | |||||
CAGAAGCGCCAGATGACGTCGACGAAGGCGCGGTGCATGTACGAGTCCGTTTCCTTGCCGTAGGCGTCGCCCGGCTTGAATACACCGGCACGCAGGCGCACCAGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1467214‑1467322‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgCCGGCTTCGATGAGCCAGGCAATCGACGAGCCGTCAGCCCTGGTGCGCCTGCGTGCCGGTGTATTCAAGCCGGGCGACGCCTACGGCAAGGAAACGGACTCGTACATGCACCGCGCCTTCGTCGACGTCATCTGGCGCTTCTGAGGCC < NC_002947/1467356‑1467209 CAGAAGCGCCAGATGACGTCGACGAAGGCGCGGTGCATGTACGAGTCCGTTTCCTTGCCGTAGGCGTCGCCCGGCTTGAATACACCGGCACGCAGGCGCACCAGGGCTGCCGGCTTCGATGAGCCAGGCAATCGACGAGCCGTC < 7:106025/144‑1CAGAAGCGCCAGATGACGTCGACGAAGGCGCGGTGCATGTACGAGTCCGTTTCCTTGCCGTAGGCGTCGCCCGGCTTGAATACACCGGCACGCAGGCGCACCAGGGCTGCCGGCTTCGATGAGCCAGGCAATCGACGAGCCGTC > 8:106025/1‑144 AGAAGCGCCAGATGACGTCGACGAAGGCGCGGTGCATGTACGAGTCCGTTTCCTTGCCGTAGGCGTCGCCCGGCTTGAATACACCGGCACGCAGGCGCACCAGGGCTGCCGGCTTCGATGAGCCAGGCAATCGACGAGCCGTCAGCC < 2:105911/147‑1 CTGCCGGCTTCGATGAGCCAGGCAATCGACGAGCCGTCAGCCCTGGTGCGCCTGCGTGCCGGTGTATTCAAGCCGGGCGACGCCTACGGCAAGGAAACGGACTCGTACATGCACCGCGCCTTCGTCGACGTCATCTGGCGCTTCTGA < 7:56383/147‑1 GCCGGCTTCGATGAGCCAGGCAATCGACGAGCCGTCAGCCCTGGTGCGCCTGCGTGCCGGTGTATTCAAGCCGGGCGACGCCTACGGCAAGGAAACGGACTCGTACATGCACCGCGCCTTCGTCGACGTCATCTGGCGCTTCTGAGGCC > 1:185987/1‑149 CAGAAGCGCCAGATGACGTCGACGAAGGCGCGGTGCATGTACGAGTCCGTTTCCTTGCCGTAGGCGTCGCCCGGCTTGAATACACCGGCACGCAGGCGCACCAGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1467214‑1467322‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgCCGGCTTCGATGAGCCAGGCAATCGACGAGCCGTCAGCCCTGGTGCGCCTGCGTGCCGGTGTATTCAAGCCGGGCGACGCCTACGGCAAGGAAACGGACTCGTACATGCACCGCGCCTTCGTCGACGTCATCTGGCGCTTCTGAGGCC < NC_002947/1467356‑1467209 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |