| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1575286 | 53 (1.080) | 3 (0.060) | 3/250 | NT | 5.3% | coding (1195/1257 nt) | galP‑II | porin‑like protein |
| ? | NC_002947 | = 1575314 | 56 (1.200) | coding (1167/1257 nt) | galP‑II | porin‑like protein | |||||
CAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1575133‑1575286‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaaATGGCGCAACTCGACCATGCGTCGCGACTTCAGCACCAACGCGTTCGATGAGAACCGCTTGATTGTGAGTTATCCGCTGAATCTTCTGTGACTCAATTGGCCTCTTCGCGGATAAACCCGCGAATAGGCCAGACGCCCTCCCTTTTGA < NC_002947/1575314‑1575167 CAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTG < 3:154459/149‑1CAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTG > 4:20535/1‑149 AGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGC > 7:86214/1‑149 TTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAA > 3:210860/1‑149 TTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAA < 5:86916/149‑1 GGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAATGGCGCAACTCGACCATGCGTCGCGACTTCAGCACCAAC < 3:20535/149‑1 GCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAATGGCGCAACTCGACCATGCGTCGCGACTTCAGCACCAACGCGT < 5:124631/137‑1 GCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAAATGGCGCAACTCGACCATGCGTCGCGACTTCAGCACCAACGCGT > 6:124631/1‑137 GCTGAAATGGCGCAACTCGACCATGCGTCGCGACTTCAGCACCAACGCGTTCGATGAGAACCGCTTGATTGTGAGTTATCCGCTGAATCTTCTGTGACTCAATTGGCCTCTTCGCGGATAAACCCGCGAATAGGCCAGACGCCCTCCCT < 5:296353/149‑1 TGAAATGGCGCAACTCGACCATGCGTCGCGACTTCAGCACCAACGCGTTCGATGAGAACCGCTTGATTGTGAGTTATCCGCTGAATCTTCTGTGACTCAATTGGCCTCTTCGCGGATAAACCCGCGAATAG < 3:150357/131‑1 TGAAATGGCGCAACTCGACCATGCGTCGCGACTTCAGCACCAACGCGTTCGATGAGAACCGCTTGATTGTGAGTTATCCGCTGAATCTTCTGTGACTCAATTGGCCTCTTCGCGGATAAACCCGCGAATAG > 4:150357/1‑131 AATGGCGCAACTCGACCATGCGTCGCGACTTCAGCACCAACGCGTTCGATGAGAACCGCTTGATTGTGAGTTATCCGCTGAATCTTCTGTGACTCAATTGGCCTCTTCGCGGATAAACCCGCGAATAGGCCAGACGCCCTCCCTTTTGA < 8:24820/149‑1 CAGGGTTTTCATCACGCTGTTGCCAATGATGCCTTCAAAAGGGAGGGCGTCTGGCCTATTCGCGGGTTTATCCGCGAAGAGGCCAATTGAGTCACAGAAGATTCAGCGGATAACTCACAATCAAGCGGTTCTCATCGAACGCGTTGGTGCTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1575133‑1575286‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaaATGGCGCAACTCGACCATGCGTCGCGACTTCAGCACCAACGCGTTCGATGAGAACCGCTTGATTGTGAGTTATCCGCTGAATCTTCTGTGACTCAATTGGCCTCTTCGCGGATAAACCCGCGAATAGGCCAGACGCCCTCCCTTTTGA < NC_002947/1575314‑1575167 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |