| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1697830 | 59 (1.210) | 6 (0.130) | 5/248 | NT | 9.7% | coding (1863/2289 nt) | PP_1492 | two‑component system sensor histidine kinase/response regulator |
| ? | NC_002947 | = 1697863 | 56 (1.210) | coding (1896/2289 nt) | PP_1492 | two‑component system sensor histidine kinase/response regulator | |||||
GGAGCGGGTGCTGGTCGTGATGCCACTCGACCCACGCCTGGGGAAGGTGCAGGACATTTCCTCCGGCGCCTTGCTCGATGATGGCTCGGTGGTCCTGATCGTCGATGTCGAAGACTTGCTACGCTCGCTGGAAAAACTGCTCAGCACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1697680‑1697830‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgggcTCCGCTGCTGCCGCGCTCGATGCGCTCCAGGCTGCCCGTGCTGAGCAGTTTTTCCAGCGAGCGTAGCAAGTCTTCGACATCGACGATCAGGACCACCGAGCCATCATCGAGCAAGGCGCCGGAGGAAATGTCCTGCACCTTC < NC_002947/1697863‑1697722 GGAGCGGGTGCTGGTCGTGATGCCACTCGACCCACGCCTGGGGAAGGTGCAGGACATTTCCTCCGGCGCCTTGCTCGATGATGGCTCGGTGGTCCTGATCGTCGATGTCGAAGACTTGCTACGCTCGCTGGAAAAACTGCTCAGCACGG < 1:237275/149‑1 GAAGGTGCAGGACATTTCCTCCGGCGCCTTGCTCGATGATGGCTCGGTGGTCCTGATCGTCGATGTCGAAGACTTGCTACGCTCGCTGGAAAAACTGCTCAGCACGGGCTCCGCTGCTGCCGCGCTCGATGCGCTCCAGGCTGCCCGTG < 2:100617/149‑1 AGGTGCAGGACATTTCCTCCGGCGCCTTGCTCGATGATGGCTCGGTGGGCCTGATCGTCGATGTCGAAGACTTGCTACGCTCGCTGGAAAAACTGCTCAGCACGGGCTCCGCTGCTGCCGCGCTCGATGCGCTCCAGGCTGCCCGTGCT < 2:219943/149‑1 CAGGACATTTCCTCCGGCGCCTTGCTCGATGATGGCTCGGTGGTCCTGATCGTCGATGTCGAAGACTTGCTACGCTCGCTGGAAAAACTGCTCAGCACGG < 5:146076/100‑1 CAGGACATTTCCTCCGGCGCCTTGCTCGATGATGGCTCGGTGGTCCTGATCGTCGATGTCGAAGACTTGCTACGCTCGCTGGAAAAACTGCTCAGCACGG > 6:146076/1‑100 CATTTCCTCCGGCGCCTTGCTCGATGATGGCTCGGTGGTCCTGATCGTCGATGTCGAAGACTTGCTACGCTCGCTGGAAAAACTGCTCAGCACGGGCTCCGCTGCTGCCGCGCTCGATGCGCTCCAGGCTGC < 3:25845/132‑1 CATTTCCTCCGGCGCCTTGCTCGATGATGGCTCGGTGGTCCTGATCGTCGATGTCGAAGACTTGCTACGCTCGCTGGAAAAACTGCTCAGCACGGGCTCCGCTGCTGCCGCGCTCGATGCGCTCCAGGCTGC > 4:25845/1‑132 TTCCTCCGGCGCCTGGCTCGATGATGGCTCGGTGGTCCTGATCGTCGATGTCGAAGACTTGCTACGCTCGCTGGAAAAACTGCTCAGCACGGGCTCCGCTGCTGCCGCGCTCGATGCGCTCCAGGCTGCCCGTGCT > 5:286024/1‑136 TTCCTCCGGCGCCTCGCTCGATGATGGCTCGGTGGTCCTGATCGTCGATGTCGAAGACTTGCTACGCTCGCTGGAAAAACTGCTCAGCACGGGCTCCGCTGCTGCCGCGCTCGATGCGCTCCAGGCTGCCCGTGCT < 6:286024/136‑1 CACGGGCTCCGCTGCTGCCGCGCTCGATGCGCTCCAGGCTGCCCGTGCTGAGCAGTTTTTCCAGCGAGCGTAGCAAGTCTTCGACATCGACGATCAGGACCACCGAGCCATCATCGAGCAAGGCGCCGGAGGAAATGTCCTGCACCTTC < 3:244964/149‑1 CACGGGCTCCGCTGCTGCCGCGCTCGATGCGCTCCAGGCTGCCCGTGCTGAGCAGTTTTTCCAGCGAGCGTAGCAAGTCTTCGACATCGACGATCAGGACCACCGAGCCATCATCGAGCAAGGCGCCGGAGGAAATGTCCTGCACCTTC > 7:54320/1‑149 GGAGCGGGTGCTGGTCGTGATGCCACTCGACCCACGCCTGGGGAAGGTGCAGGACATTTCCTCCGGCGCCTTGCTCGATGATGGCTCGGTGGTCCTGATCGTCGATGTCGAAGACTTGCTACGCTCGCTGGAAAAACTGCTCAGCACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1697680‑1697830‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgggcTCCGCTGCTGCCGCGCTCGATGCGCTCCAGGCTGCCCGTGCTGAGCAGTTTTTCCAGCGAGCGTAGCAAGTCTTCGACATCGACGATCAGGACCACCGAGCCATCATCGAGCAAGGCGCCGGAGGAAATGTCCTGCACCTTC < NC_002947/1697863‑1697722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |