New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1928975 | 60 (1.230) | 3 (0.070) | 3/244 | NT | 5.0% | coding (1117/2154 nt) | PP_1728 | membrane protein |
? | NC_002947 | = 1929003 | 57 (1.250) | coding (1089/2154 nt) | PP_1728 | membrane protein |
GATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1928823‑1928975 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccagcacCGCCCTGCGCCAGTCGCTGATGTGCACCGTGCTGGTGGTGGTGTGCATGGTGCTCAACGGCCTGGTGCGACGCCATGCCGCCAACCCCAAGCGGGCCAGCAAGCGCCAGGCGGTGTACACCGAACGCCTGCGCAACTTCGGCTA < NC_002947/1929003‑1928860 GATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCA > 6:30747/1‑149 CGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACCGCCCTGCCCCAGTCGCTGATGTGCACCGTGCTGGTG < 1:172082/149‑1 AGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACCGCCCTGCGCCAGTCGCTGATGTGCACCGTGCTGGTGGTG < 1:258780/149‑1 CGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACCGCCCTGCGCCAGTCGCTGATGTGCACCGTGCTGGTGGTG > 8:147572/1‑124 CAGCACCGCCCTGCGCCAGTCGCTGATGTGCACCGTGCTGGTGGTGGTGTGCATGGTGCTCAACGGCCTGGTGCGACGCCATGCCGCCAACCCCAAGCGGGCCAGCAAGCGCCAGGCGGTGTACACCGAACGCCTGCGCAACTTCGGC > 6:114262/1‑148 AGCACCGCCCTGCGCCAGTCGCTGATGTGCACCGTGCTGGTGGTGGTGTGCATGGTGCTCAACGGCCTGGTGCGACGCCATGCCGCCAACCCCAAGCGGGCCAGCAAGCGCCAGGCGGTGTACACCGAACGCCTGCGCAACTTCGGCTA > 6:29672/1‑149 GATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1928823‑1928975 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccagcacCGCCCTGCGCCAGTCGCTGATGTGCACCGTGCTGGTGGTGGTGTGCATGGTGCTCAACGGCCTGGTGCGACGCCATGCCGCCAACCCCAAGCGGGCCAGCAAGCGCCAGGCGGTGTACACCGAACGCCTGCGCAACTTCGGCTA < NC_002947/1929003‑1928860 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |