New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2049003 = | 60 (1.230) | 3 (0.060) | 3/250 | NT | 5.3% | coding (269/372 nt) | PP_1822 | hypothetical protein |
? | NC_002947 | 2049046 = | 50 (1.070) | coding (226/372 nt) | PP_1822 | hypothetical protein |
CAAGGGGCTGGCGCTGTACCAGTTCCACGCCTGCCCGTTCTGTGTCAAAACCCGCCGCACACTGCACCGCTTGAACGTGCCGGTGGCGCTGCGCGACGCCAAGAACGACCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2049152‑2049003 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggtCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTT > NC_002947/2049046‑2049151 CAAGGGGCTGGCGCTGTACCAGTTCCACGCCTGCCCGTTCTGTGTCAAAACCCGCCGCACACTGCACCGCTTGAACGTGCCGGTGGCGCTGCGCGACGCCAAGAACGACCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGG < 5:279621/149‑1 AAGGGGCTGGCGCTGTACCAGTTCCACGCCTGCCCGTTCTGTGTCAAAACCCGCCGCACACTGCACCGCTTGAACGTGCCGGTGGCGCTGCGCGACGCCAAGAACGACCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGGT > 4:28823/1‑149 AAGGGGCTGGCGCTGTACCAGTTCCACGCCTGCCCGTTCTGTGTCAAAACCCGCCGCACACTGCACCGCTTGAACGTGCCGGTGGCGCTGCGCGACGCCAAGAACGACCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGGT < 5:87548/149‑1 AAGGGGCTGGCGCTGTACCAGTTCCACGCCTGCCCGTTCTGTGTCAAAACCCGCCGCACACTGCACCGCTTGAACGTGCCGGTGGCGCTGCGCGACGCCAAGAACGACCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGGT < 7:73149/149‑1 ACCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTT > 2:115194/1‑149 CCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGG < 3:241168/131‑1 CCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGG > 4:241168/1‑131 CAAGGGGCTGGCGCTGTACCAGTTCCACGCCTGCCCGTTCTGTGTCAAAACCCGCCGCACACTGCACCGCTTGAACGTGCCGGTGGCGCTGCGCGACGCCAAGAACGACCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2049152‑2049003 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggtCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTT > NC_002947/2049046‑2049151 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |