| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2086546 = | NA (NA) | 6 (0.130) | 6/254 | NT | NA | coding (661/1302 nt) | PP_1865 | transposase |
| ? | NC_002947 | 2086577 = | NA (NA) | coding (692/1302 nt) | PP_1865 | transposase | |||||
ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086697‑2086546‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCT > NC_002947/2086577‑2086723 ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGG > 1:139788/1‑149 CTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGC > 6:196847/1‑149 CTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGC < 4:84439/149‑1 CTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTG < 4:71062/148‑1 GCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCC > 4:242969/1‑149 GCGCACAGTGCCTGTGGCGACGGGCATCGGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGA > 6:272707/1‑135 GCGCACAGTGCCTGTGGCGACGGGCATCGGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGA < 5:272707/135‑1 ACAGTGCCTGTGGCGACGGGCA‑CTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCAT > 2:286941/1‑149 AGTGCCTGTGGCGACGGGCA‑CTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCAT > 5:208240/1‑147 CCTGTGGCGACGGGCA‑CTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGC < 1:286941/149‑1 TGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCATGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTT < 8:212495/148‑1 TGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTT < 6:5881/148‑1 TGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTT < 1:247955/148‑1 GCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGA < 7:164501/119‑1 GCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGA > 8:164501/1‑119 CGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCT < 6:208240/148‑1 CGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCT < 1:4442/148‑1 CGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGC > 7:285814/1‑130 CGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGC > 4:151138/1‑112 CGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGC < 3:151138/112‑1 CGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGT > 2:79115/1‑81 CGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGT < 1:79115/81‑1 ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086697‑2086546‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCT > NC_002947/2086577‑2086723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |