| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2263994 = | 50 (1.020) | 5 (0.100) | 5/262 | NT | 8.5% | intergenic (+166/‑57) | trpF/accD | N‑(5'‑phosphoribosyl)anthranilate isomerase/acetyl‑CoA carboxylase carboxyltransferase subunit beta |
| ? | NC_002947 | 2264033 = | 57 (1.170) | intergenic (+205/‑18) | trpF/accD | N‑(5'‑phosphoribosyl)anthranilate isomerase/acetyl‑CoA carboxylase carboxyltransferase subunit beta | |||||
GCTCTTTTTCACCTCGGAACGCATGATCGAAGGGATCAGTTTGTCGACTAACCAGTTGCTCATGCTTTCTTTCTCCAGTATTGGCAGGCGGGGGACGGCGTCACCGGCCCTGCCCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2264113‑2263994‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGTCGACAAACTGATCCCTTCGATCATGCGTTCCGAGGTGAAAAAGAGCTCGGTGCCTGAGGGCCTGTGGCACAAGTGCCCGTCCTGCGAGGCCGTGCTGTATC > NC_002947/2264033‑2264168 GCTCTTTTTCACCTCGGAACGCATGATCGAAGGGATCAGTTTGTCGACTAACCAGTTGCTCATGCTTTCTTTCTCCAGTATGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAA > 3:222197/1‑136GCTCTTTTTCACCTCGGAACGCATGATCGAAGGGATCAGTTTGTCGACTAACCAGTTGCTCATGCTTTCTTTCTCCAGTATGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAA < 4:222197/136‑1 CAGTATTGGCAGGCGGGGGACGGCGTCACCGGCCCTGCCCTGCCCATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGTCGACAAACTGATCCCTTCGATCATGCGTTCCGAGGTGAAAAAGA > 6:183401/1‑124 AGTATTGGCAGGCGGGGGACGGCGTCACCGGCCCTGCCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGTCGACAAACTGATCCCTTCGATCATGCGTTCCGAGGTGAAAAAGAGCTCGGTGCCTGAGGGCCTGTGGCA > 4:135088/1‑148 CCCTGCCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGTCGACAAACTGATCCCTTCGATCATGCGTTCCGAGGTGAAAAAGAGCTCGGTGCCTGAGGGCCTGTGGCACAAGTGCCCGTCCTGCGAGGCCGTGCTGTATC < 3:135088/149‑1 GCTCTTTTTCACCTCGGAACGCATGATCGAAGGGATCAGTTTGTCGACTAACCAGTTGCTCATGCTTTCTTTCTCCAGTATTGGCAGGCGGGGGACGGCGTCACCGGCCCTGCCCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2264113‑2263994‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGTCGACAAACTGATCCCTTCGATCATGCGTTCCGAGGTGAAAAAGAGCTCGGTGCCTGAGGGCCTGTGGCACAAGTGCCCGTCCTGCGAGGCCGTGCTGTATC > NC_002947/2264033‑2264168 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |