| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2367573 | 42 (0.860) | 3 (0.060) | 3/254 | NT | 7.3% | coding (391/4866 nt) | gdhB | NAD‑specific glutamate dehydrogenase |
| ? | NC_002947 | = 2367638 | 35 (0.740) | coding (456/4866 nt) | gdhB | NAD‑specific glutamate dehydrogenase | |||||
ACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCCACACCCTGCAAACCACCGTGCTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2367424‑2367573‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgCACGCCTTCGCCCTGGGTTCCCTTGGGCAGCAGCTCCAACAGCTCGCCCTTGGCGCCACGGCGCACGCTGAGCACGGTGGTTTGCAGGGTGTGGATGCTGTAGCCACGGCGGTTGAGCTCGGTGCGCACCGAGTCGACCAGGAACGGC < NC_002947/2367638‑2367491 ACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCCACACCCTGCAAACCACCGTGCTCAGC < 6:254768/149‑1ACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCCACACCCTGCAAACCACCGTGCTCAGC > 8:225333/1‑149 GCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCCACACCCTGCAAACCACCGTGCTCAG < 3:257687/123‑1 CTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCCACACCCTGCAAACCACCGTGCTCAGCGCACGCCTTCGCCCTGGGTTCCCTTGGGCAGCAGCTCCAACAGCTCGCCCTTGGCGCCACGGCG > 5:142208/1‑148 TTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCCACACCCTGCAAACCACCGTGCTCAGCGCACGCCTTCGCCCTGGGTTCCCTTGGGCAGCAGCTCCAACAGCTCGCCCTTGGCGCCACGGCGCACGCTG < 6:142208/149‑1 GTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCCACACCCTGCAAACCACCGTGCTCAGCGCACGCCTTCGCCCTGGGTTCCCTTGGGCAGCAGCTCCAACAGCTCGCCCTTGGCGCCACGGCGCACGCTGAGCAC < 3:188116/148‑1 GCGCACGCCTTCGCCCTGGGTTCCCTTGGGCAGCAGCTCCAACAGCTCGCCCTTGGCGCCACGGCGCACGCTGAGCACGGTGGTTTGCAGGGTGTGGATGCTGTAGCCACGGCGGTTGACCTCGGTGCGCACCGAGTCGACCAGGAAC < 1:173357/148‑1 GCACGCCTTCGCCCTGGGTTCCCTTGGGCAGCAGCTCCAACAGCTCGCCCTTGGCGCCACGGCGCACGCTGAGCACGGTGGTTTGCAGGGTGTGGATGCTGTAGCCACGGCGGTTGAGCTCGGTGCGCACCGAGTCGACCAGGCACGGC > 6:207216/1‑149 ACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCCACACCCTGCAAACCACCGTGCTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2367424‑2367573‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgCACGCCTTCGCCCTGGGTTCCCTTGGGCAGCAGCTCCAACAGCTCGCCCTTGGCGCCACGGCGCACGCTGAGCACGGTGGTTTGCAGGGTGTGGATGCTGTAGCCACGGCGGTTGAGCTCGGTGCGCACCGAGTCGACCAGGAACGGC < NC_002947/2367638‑2367491 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |