| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2460048 = | 55 (1.120) | 5 (0.110) | 5/252 | NT | 8.5% | coding (245/717 nt) | ugpQ | glycerophosphoryl diester phosphodiesterase |
| ? | NC_002947 | 2460096 = | 55 (1.170) | coding (197/717 nt) | ugpQ | glycerophosphoryl diester phosphodiesterase | |||||
CCGCTGCGAGCTGGACCTGCACTTGTCATCCGACAACGAACTGATGGTCATCCACGACCCCACCCTCAAGCGCACCACGGGCCGGCGCGGCAAAGTGGTCGAGCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGGCCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2460200‑2460048‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggTGCTCGACCACTTTGCCGCGCCGGCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCCAGCTCGCAGCGGGTCACGCCATGGGACAGGCATTGCTGAAAGCTCTTCAGGGTG > NC_002947/2460096‑2460242 CCGCTGCGAGCTGGACCTGCACTTGTCATCCGACAACGAACTGATGGTCATCCACGACCCCACCCTCAAGCGCACCACGGGCCGGCGCGGCAAAGTGGTCGAGCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGGCC > 6:288226/1‑149 CTGCGAGCTGGACCTGCACTTGTCATCCGACAACGAACTGATGGTCATCCACGACCCCACCCTCAAGCGCACCACGGGCCGGCGCGGCAAAGTGGTCGAGCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGGCCCGG < 5:58223/149‑1 GCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGGCCCGGGTGCTCGACCACTTTGCCGCGCCGGCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCC < 5:77245/144‑1 GCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGGCCCGGGTGCTCGACCACTTTGCCGCGCCGGCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCC > 6:77245/1‑144 CCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGGCCCGGGTGCTCGACCACTTTGCCGCGCCGGCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTAGTTGTAGGATGACAAGTGCAGGTACAGCTCGCA > 2:307067/1‑149 CCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGG‑CCGGGTGCTCGACCACTTTGCCGCGCCGGCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCCAGCTCGCAGC > 5:300584/1‑149 GCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGG‑CCGGGTGCTCGACCACTTTGCCGCGCCGGCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCCAGCTCGCAGCGGGTCA < 6:300584/149‑1 GGTGCTCGACCACTTTGCCGCGCCGGCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCCAGCTCGCAGCGGGTCACGCCATGGGACAGGCATTGCTGAAAGCTCTTCAGGGTG < 1:307067/149‑1 CCGCTGCGAGCTGGACCTGCACTTGTCATCCGACAACGAACTGATGGTCATCCACGACCCCACCCTCAAGCGCACCACGGGCCGGCGCGGCAAAGTGGTCGAGCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGGCCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2460200‑2460048‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggTGCTCGACCACTTTGCCGCGCCGGCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCCAGCTCGCAGCGGGTCACGCCATGGGACAGGCATTGCTGAAAGCTCTTCAGGGTG > NC_002947/2460096‑2460242 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |