| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2493059 = | 36 (0.740) | 4 (0.090) | 3/248 | NT | 10.4% | coding (2482/2883 nt) | PP_2185 | formate dehydrogenase subunit alpha |
| ? | NC_002947 | 2493110 = | 35 (0.760) | coding (2533/2883 nt) | PP_2185 | formate dehydrogenase subunit alpha | |||||
CTTGGCACGCAGCACAGTCTGCCCGGCGCGGCTGCCGATGCCGACCCAGTCACCGTCTTGGATGCCACGGCTTTCAGCGTCGGTCGGGTGGATCTCCAGGCGGTCGGCGTCATGCCAGGCGACGTTGCCGGTACGCCGGGTCTGGGCGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2493211‑2493059‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgacCGCCTGGAGATCCACCCGACCGACGCTGAAAGCCGTGGCATCCAAGACGGTGACTGGGTCGGCATCGGCAGCCGCGCCGGGCAGACTGTGCTGCGTGCCAAGGTCA > NC_002947/2493110‑2493215 CTTGGCACGCAGCACAGTCTGCCCGGCGCGGCTGCCGATGCCGACCCAGTCACCGTCTTGGATGCCACGGCTTTCAGCGTCGGTCGGGTGGATCTCCAGGCGGTCGGCGTCATGCCAGGCGACGTTGCCGGTACGCCGGGTCTGGGCGC < 8:285344/149‑1 TTGGCACGCAGCACAGTCTGCCCGGCGCGGCTGCCGATGCCGACCCAGTCACCGTCTTGGATGCCACGGCTTTCAGCGTCGGTCGGGTGGATCTCCAGGCGGTCGGCGTCATGCCAGGCGACGTTGCCGGTACGCAGGGTCTGGGCGCC > 4:229823/1‑149 GGTCGGCGTCATGCCAGGCGACGTTGCCGGTACGCCGGGTCTGGGCGCCGACCGCCTGGAGATCCACCCGACCGACGCTGAAAGCCGTGGCATCCAAGACGGTGACTGGGTCGGCATCGGCAGCCGCGCCGGGCAGACTGTGCTGCGTG > 7:171208/1‑149 TCGGCGTCATGCCAGGCGACGTTGCCGGTACGCCGGGTCTGGGCGCCGACCGCCTGGAGATCCACCCGACCGACGCTGAAAGCCGTGGCATCCAAGACGGTGACTGGGTCGGCATCGGCAGCCGCGCCGGGCAGACTGTGCTGCGTGC > 4:74656/1‑148 CATGCCAGGCGACGTTGCCGGTACGCCGGGTCTGGGCGCCGACCGCCTGGAGATCCACCCGACCGACGCTGAAAGCCGTGGCATCCAAGACGGTGACTGGGTCGGCATCGGCAGCCGCGCCGGGCAGACTGTGCTGCGTGCCAAGGTCA < 3:74656/149‑1 ATGCCAGGCGACGTTGCCGGTACGCCGGGTCTGGGCGCCGACCGCCTGGAGATCCACCCGACCGACGCTGAAAGCCGTGGCATCCAAGACGGTGACTGGGTCGGCATCGGCAGCCGCGCCGGGCAGACTGTGCTGCGTGCCAAGGTCA < 8:171208/148‑1 CTTGGCACGCAGCACAGTCTGCCCGGCGCGGCTGCCGATGCCGACCCAGTCACCGTCTTGGATGCCACGGCTTTCAGCGTCGGTCGGGTGGATCTCCAGGCGGTCGGCGTCATGCCAGGCGACGTTGCCGGTACGCCGGGTCTGGGCGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2493211‑2493059‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgacCGCCTGGAGATCCACCCGACCGACGCTGAAAGCCGTGGCATCCAAGACGGTGACTGGGTCGGCATCGGCAGCCGCGCCGGGCAGACTGTGCTGCGTGCCAAGGTCA > NC_002947/2493110‑2493215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |