New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2751160 =	54 (1.100)	4 (0.090)	4/248	NT	7.8%	intergenic (‑225/‑14)	aroQ‑II/czcC‑II	type II 3‑dehydroquinate dehydratase/cobalt‑zinc‑cadmium resistance protein
	?	NC_002947	2751195 =	43 (0.930)					coding (22/1278 nt)	czcC‑II	cobalt‑zinc‑cadmium resistance protein

TTCTGGGCGAAAGCGGCGGTAAGCGCCT‑GGGGCAGGCTCAGCACCTGGCTGGCCTGGGCGTCGGTGGCACTGGCCAGCAGCAGACAGAGCAAGGCGATCTTGCGGGGGATGGGCACGAAACAGTCCTCTGGGCGAAGCATTGGCCAG‑GGACTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2751313‑2751160 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggactgtTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCTTTCGCCCAGAACCCGGAGCTGGCTGCAGCTGGCCGTG  >  NC_002947/2751195‑2751339                                                                                                                                                                                                                                                                                                               TTCTGGGCGAAAGCGGCGGTAAGCGCCT‑GGGGCAGGCTCAGCACCTGGCTGGCCTGGGCGTCGGTGGCACTGGCCAGCAGCAGACAGAGCAAGGCGATCTTGCGGGGGATGGGCACGAAACAGTCCTCTGGGCGAAGCATTGGCCAG‑G                                                                                                                                                         >  5:138650/1‑148     GGGCGAAAGCGGCGGTAAGCGCCT‑GGGGCAGGCTCAGCACCTGGCTGGCCTGGGCGTCGGTGGCACTGGCCAGCAGCAGACAGAGCAAGGCGATCTTGCGGGGGATGGGCACGAAACAGTCCTCTGGGCGAAGCATTGGCCAG‑GGACTG                                                                                                                                                    >  8:109684/1‑149      GGCGAAAGCGGCGGTAAGCGCCTGGGGGCAGGCTCAGCACCTGGCTGGCCTGGGCGTCGGTGGCACTGGCCAGCAGCAGACAGAGCAAGGCGATCTTGCGGGGGATGGGCACGAAACAGTCCTCTGGGCGAAGCATTGGCCAG‑GGACTG                                                                                                                                                    >  1:3916/1‑149       GCGAAAGCGGCGGTAAGCGCCT‑GGGGCAGGCTCAGCACCTGGCTGGCCTGGGCGTCGGTGGCACTGGCCAGCAGCAGACAGAGCAAGGCGATCTTGCGGGGGATGGGCACGAAACAGTCCTCTGGGCGAAGCATTGGCCAG‑GGACTG                                                                                                                                                    >  8:52613/1‑147        CGAAAGCGGCGGTAAGCGCCT‑GGGGCAGGCTCAGCACCTGGCTGGCCTGGGCGTCGGTGGCACTGGCCAGCAGCAGACAGAGCAAGGCGATCTTGCGGGGGATGGGCACGAAACAGTCCTCTGGGCGAAGCATTGGCCAG‑GGACTG                                                                                                                                                    >  1:51494/1‑146              CGGCGGTAAGCGCCT‑GGGGCAGGCTCAGCACCTGGCTGGCCTGGGCGTCGGTGGCACTGGCCAGCAGCAGACAGAGCAAGGCGATCTTGCGGGGGATGGGCACGAAACAGTCC‑CTGGCCAATGCTTCGCCCAGAGGACTGTTTCGTGCC                                                                                                                                           <  6:3953/149‑1                                                                                                                   CACGAAACAGTCCTCTGGGCGAAGCATTGGCCAG‑GGACTGTTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCT                                       >  8:220191/1‑149                                                                                                                     CGAAACAGTCCTCTGGGCGAAGCATTGGCCAG‑GGACTGTTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCTTT                                     <  7:220191/149‑1                                                                                                                            GTCCTCTGGGCGAAGCATTGGCCAG‑GGACTGTTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGTCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCTTTCGCC                                 >  3:71525/1‑146                                                                                                                                                         CTGTTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCTTTCGCCCAGAACCCGGAGCTGGCTGCAACTGGCCGT   >  4:95054/1‑148                                                                                                                                                          TGTTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCTTTCGCCCAGAACCCGGAGCTGGCTGCAGCTGGCCGTG  >  1:40102/1‑148                                                                                                                                                                                                                                                                                                               TTCTGGGCGAAAGCGGCGGTAAGCGCCT‑GGGGCAGGCTCAGCACCTGGCTGGCCTGGGCGTCGGTGGCACTGGCCAGCAGCAGACAGAGCAAGGCGATCTTGCGGGGGATGGGCACGAAACAGTCCTCTGGGCGAAGCATTGGCCAG‑GGACTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2751313‑2751160 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggactgtTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCTTTCGCCCAGAACCCGGAGCTGGCTGCAGCTGGCCGTG  >  NC_002947/2751195‑2751339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.