| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3365539 | 72 (1.470) | 4 (0.090) | 4/250 | NT | 5.5% | coding (207/1002 nt) | PP_2962 | alcohol dehydrogenase |
| ? | NC_002947 | = 3365557 | 68 (1.460) | coding (225/1002 nt) | PP_2962 | alcohol dehydrogenase | |||||
GTGCGCCACATCGCCCGCCCTGTGCCCGGTAAGGGGCAGGTTTTGGTGCGGATTCACGCCGCCGGGGTCAACCCGCTCGACACCAAGATTGCAATCGGTGCGGGTGCTCACGCCCGCCAGGAGTTGCCGGCCGTGCTCGGCCTGGATCTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3365387‑3365539‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcgccCAGTTCGACGACCGTACCGGCGAGATCCAGGCCGAGCACGGCCGGCAACTCCTGGCGGGCGTGAGCACCCGCACCGATTGCAATCTTGGTGTCGAGCGGGTTGACCCCGGCGGCGTGAATCCGCACCAAAACCTGCCCCTTACCGG < NC_002947/3365557‑3365412 GTGCGCCACATCGCCCGCCCTGTGCCCGGTAAGGGGCAGGTTTTGGTGCGGATTCACGCCGCCGGGGTCAACCCGCTCGACACCAAGATTGCAATCGGTGCGGGTGCTCACGCCCGCCAGGAGTTGCCGGCCGTGCTCGGCCTGGATCT > 2:199499/1‑149 GCGCCACATCGCCCGCCCTGTGCCCGGTAAGGGGCAGGTTTTGGTGCGGATTCACGCCGCCGGGGTCAACCCGCTCGACACCAAGATTGCAATCGGTGCGGGTGCTCACGCCCGCCAGGAGTTGCCGGCCGTGCTCGGCCTGGATCTCG > 6:311078/1‑149 GCGCCACATCGCCCGCCCTGTGCCCGGTAAGGGGCAGGTTTTGGTGCGGATTCACGCCGCCGGGGTCAACCCGCTCGACACCAAGATTGCAATCGGTGCGGGTGCTCACGCCCGCCAGGAGTTGCCGGCCGTGCTCGGCCTGGATCTCG > 7:4784/1‑149 GATTCACGCCGCCGGGGTCAACCCGCTCGACACCAAGATTGCAATCGGTGCGGGTGCTCACGCCCGCCAGGAGTTGCCGGCCGTGCTCGGCCTGGATCTCGCCCAGTTCGACGACCGTACCGGCGAGAT < 5:270579/129‑1 GATTCACGCCGCCGGGGTCAACCCGCTCGACACCAAGATTGCAATCGGTGCGGGTGCTCACGCCCGCCAGGAGTTGCCGGCCGTGCTCGGCCTGGATCTCGCCCAGTTCGACGACCGTACCGGCGAGAT > 6:270579/1‑129 CGCCGCCGGGGTCAACCCGCTCGACACCAAGATTGCAATCGGTGCGGGTGCTCACGCCCGCCAGGAGTTGCCGGCCGTGCTCGGCCTGGATCTCGCCCAGTTCGACGACCGTACCGGCGAGATCCAG < 5:205564/127‑1 CGCCGCCGGGGTCAACCCGCTCGACACCAAGATTGCAATCGGTGCGGGTGCTCACGCCCGCCAGGAGTTGCCGGCCGTGCTCGGCCTGGATCTCGCCCAGTTCGACGACCGTACCGGCGAGATCCAG > 6:205564/1‑127 CTCGCCCAGTTCGACGACCGTACCGGCGAGATCCAGGCCGAGCACGGCCGGCAACTCCTGGCGGGCGTGAGCACCCGCACCGATTGCAATCTTGGTGTCGAGCGGGTTGACCCCGGCGGCGTGAATCCGCACCAAAACCTGCCCCTTAC < 6:221704/149‑1 GCCCAGTTCGACGACCGTACCGGCGAGATCCAGGCCGAGCACGGCCGGCAACTCCTGGCGGGCGTGAGCACCCGCACCGATTGCAATCTTGGTGTCGAGCGGGTTGACCCCGGCGGCGTGAATCCGCACCAAAACCTGCCCCTTACCGG > 5:41100/1‑149 GTGCGCCACATCGCCCGCCCTGTGCCCGGTAAGGGGCAGGTTTTGGTGCGGATTCACGCCGCCGGGGTCAACCCGCTCGACACCAAGATTGCAATCGGTGCGGGTGCTCACGCCCGCCAGGAGTTGCCGGCCGTGCTCGGCCTGGATCTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3365387‑3365539‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcgccCAGTTCGACGACCGTACCGGCGAGATCCAGGCCGAGCACGGCCGGCAACTCCTGGCGGGCGTGAGCACCCGCACCGATTGCAATCTTGGTGTCGAGCGGGTTGACCCCGGCGGCGTGAATCCGCACCAAAACCTGCCCCTTACCGG < NC_002947/3365557‑3365412 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |