| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3971327 | NA (NA) | 6 (0.130) | 4/250 | NT | NA | coding (1246/1536 nt) | PP_3501 | transposase |
| ? | NC_002947 | = 3971367 | NA (NA) | coding (1286/1536 nt) | PP_3501 | transposase | |||||
GAACGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3971174‑3971327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagccCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGAC < NC_002947/3971367‑3971220 GAACGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTA < 3:235270/149‑1 GCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGC < 3:21166/149‑1 GCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGC > 4:219806/1‑149 CCAAGCGCGGGACATGAGTGATGAAGATCGTTGGTGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCC > 1:141703/1‑149 AAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCC > 8:138146/1‑148 ATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACA > 8:167567/1‑126 ATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACA < 7:167567/126‑1 atTGGCGGTGCCGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGCGAGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAA < 2:195984/147‑1 ATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAAT < 7:138146/149‑1 AATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGG > 3:140089/1‑131 AATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGG < 4:140089/131‑1 AAAAAACTGCATGACTGGATGTTGGCTCAGCGCGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTg < 7:150950/142‑2 GTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATC > 7:169322/1‑148 CAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCC < 6:280335/149‑1 AGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCT < 5:269296/149‑1 CCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGA < 8:90896/149‑1 CCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGA > 7:163693/1‑149 CCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGA > 6:106210/1‑149 CCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGATTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGA < 5:166177/149‑1 CCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGAC < 5:190338/149‑1 GAACGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3971174‑3971327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagccCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGAC < NC_002947/3971367‑3971220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |