New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4523349 =	55 (1.120)	4 (0.080)	4/254	NT	7.1%	coding (1198/2226 nt)	idh	isocitrate dehydrogenase
	?	NC_002947	4523381 =	51 (1.080)					coding (1230/2226 nt)	idh	isocitrate dehydrogenase

CGTTCGGCACGCTGCCCATGGTGGTCGGGTCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4523382‑4523349 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaCGTTGGCCTGATGGCGCAGAAAGCCGAAGAGTATGGCTCCCACGACAAGACCTTCCAGATCAAGGCTGACGGCGTGGTTCGCGTAGTCGATGGCAAGGGCAAC  >  NC_002947/4523381‑4523483                                                                                                                                           CGTTCGGCACGCTGCCCATGGTGGTCGGGTCGAACGTTGGCCTGATGGCGCAGAAAGCCGAAGAGTATGGCTCCCACGACAAGACCTTCCAGATCAAGGCTGACGGCGTGGTTCGCGTAGTCGATGGCAAGGGCAAC  >  7:77057/1‑137 CGTTCGGCACGCTGCCCATGGTGGTCGGGTCGAACGTTGGCCTGATGGCGCAGAAAGCCGAAGAGTATGGCTCCCACGACAAGACCTTCCAGATCAAGGCTGACGGCGTGGTTCGCGTAGTCGATGGCAAGGGCAAC  <  8:77057/137‑1  GTTCGGCACGCTGCCCATGGTGGTCGGGTCGAACGTTGGCCTGATGGCGCAGAAAGCCGAAGAGTATGGCTCCCACGACAAGACCTTCCAGATCAAGGCTGACGGCGTGGTTCGCGTAGTC                 >  5:235179/1‑121  GTTCGGCACGCTGCCCATGGTGGTCGGGTCGAACGTTGGCCTGATGGCGCAGAAAGCCGAAGAGTATGGCTCCCACGACAAGACCTTCCAGATCAAGGCTGACGGCGTGGTTCGCGTAGTC                 <  6:235179/121‑1                                                                                                                                           CGTTCGGCACGCTGCCCATGGTGGTCGGGTCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4523382‑4523349 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaCGTTGGCCTGATGGCGCAGAAAGCCGAAGAGTATGGCTCCCACGACAAGACCTTCCAGATCAAGGCTGACGGCGTGGTTCGCGTAGTCGATGGCAAGGGCAAC  >  NC_002947/4523381‑4523483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.