New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4635401 = | 60 (1.230) | 4 (0.090) | 4/252 | NT | 6.6% | coding (355/639 nt) | uvrY | BarA/UvrY two‑componenent system response regulator |
? | NC_002947 | 4635439 = | 55 (1.170) | coding (317/639 nt) | uvrY | BarA/UvrY two‑componenent system response regulator |
TGCTGCGCAGCCACCCTGACATCAAGGTAGTGGCGGTGACGGTGTGCGAGGAAGACCCGTTCCCCACACGCTTGTTGCAGGCCGGCGCTGCCGGCTACCTGACCAAGGGTGCAGGCCTTGACGAAATGGTCCAGGCCATTCGTCTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4635550‑4635401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCAGGCCGCCGATGCCGGG > NC_002947/4635439‑4635584 TGCTGCGCAGCCACCCTGACATCAAGGTAGTGGCGGTGACGGTGTGCGAGGAAGACCCGTTCCCCACACGCTTGTTGCAGGCCGGCGCTGCCGGCTACCTGACCAAGGGTGCAGGCCTTGACGAAATGGTCCAGGCCATTCGTCTGGCC > 5:278216/1‑149 GCTGCGCAGCCACCCTGACATCAAGGTAGTGGCGGTGACGGTGTGCGAGGAAGACCCGTTCCCCACACGCTTGTTGCAGGCCGGCGCTGCCGGCTACCTGACCAAGGGTGCAGGCCTTGACGAAATGGTCCAGGCCATTCGTCTGGCCT > 7:135671/1‑149 CTGCCATCAAGGTAGTGGCGGTGACGGTGTGCGAGGAAGACCCGTTCCCCACACGCTTGTTGCAGGCCGGCGCTGCCGGCTACCTGACCAAGGGTGCAGGCCTTGACGAACTGGTCCAGGCACTTCGTCTGGCCg > 4:112409/1‑134 AGGCCTTGACGAAATGGTCCAGGCCATTCGTCTGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACG < 7:122617/93‑1 AGGCCTTGACGAAATGGTCCAGGCCATTCGTCTGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACG > 8:122617/1‑93 GCCTTGACGAAATGGTCCAGGCCATTCGTCTGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGAT < 5:122757/128‑1 GCCTTGACGAAATGGTCCAGGCCATTCGTCTGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGAT > 6:122757/1‑128 CTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCAGGCCGCCGATGCCGGG > 4:115053/1‑148 TGCTGCGCAGCCACCCTGACATCAAGGTAGTGGCGGTGACGGTGTGCGAGGAAGACCCGTTCCCCACACGCTTGTTGCAGGCCGGCGCTGCCGGCTACCTGACCAAGGGTGCAGGCCTTGACGAAATGGTCCAGGCCATTCGTCTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4635550‑4635401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCAGGCCGCCGATGCCGGG > NC_002947/4635439‑4635584 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |