New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4644332 =	51 (1.040)	7 (0.160)	7/242	NT	14.3%	coding (1199/1251 nt)	PP_4108	4‑aminobutyrate aminotransferase
	?	NC_002947	4644363 =	37 (0.820)					coding (1230/1251 nt)	PP_4108	4‑aminobutyrate aminotransferase

ATTACGGCCCGATCGTCAACGGCCATGCCGAACTGGAAGGCGGCTGGATCGCCTTCGAGTCCGACATGCTTACCCCGGAAGAACTCGGCCTGTAAGCCTCAGTTCAGTTCTGCCAGGCACTGCTCGAGGATATCCAACCCCTCCTCGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4644482‑4644332 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcctcgagcaGTGCCTGGCAGAACTGAACTGAGGCTTACAGGCCGAGTTCTTCCGGGGTAAGCATGTCGGACTCGAAGGCGATCCAGCCGCCTTCCAGTTCGGCATGGCCGTTGACGATCGGGCCGTAATAGGTCAGGCCGTTCTCCAGGGTTAC  >  NC_002947/4644363‑4644507                                                                                                                                                                                                                                                                                                          ATTACGGCCCGATCGTCAACGGCCATGCCGAACTGGAAGGCGGCTGGATCGCCTTCGAGTCCGACATGCTTACCCCGGAAGAACTCGGCCTGTAAGCCTCAGTTCAGTTCTGCCAGGCACTGCTCGAGGATATCCAACCCCTCCTCGAG                                                                                                                                                     >  5:178404/1‑149  TTACGGCCCGATCGTCAACGGCCATGCCGAACTGGAAGGCGGCTGGATCGCCTTCGAGTCCGACATGCTTACCCCGGAAGAACTCGGCCTGTAAGCCTCAGTTCAGTTCTGCCAGGCACTGCTCGAGGATATCCAACCCCTCCTCGAGC                                                                                                                                                    <  5:179750/149‑1  TTACGGCCCGATCGTCAACGGCCATGCCGAACTGGAAGGCGGCTGGATCGCCTTCGAGTCCGACATGCTTACCCCGGAAGAACTCGGCCTGTAAGCCTCAGTTCAGTTCTGCCAGGCACTGCTCGAGGATATCCAACCCCTCCTCGAGC                                                                                                                                                    <  7:193481/149‑1                                                                                                                 CCAGGCACTGCTCGAGGATATCCAACCCCTCCTCGAGCAGTGCCTGGCAGAACTGAACTGAGGCTTACAGGCCGAGTTCTTCCGGGGTAAGCATGTCGGACTCGAAGGCGATCCAGCCGCCTTCCAGTTCG                                                       <  5:264342/131‑1                                                                                                                 CCAGGCACTGCTCGAGGATATCCAACCCCTCCTCGAGCAGTGCCTGGCAGAACTGAACTGAGGCTTACAGGCCGAGTTCTTCCGGGGTAAGCATGTCGGACTCGAAGGCGATCCAGCCGCCTTCCAGTTCG                                                       >  6:264342/1‑131                                                                                                                   AGGCACTGCTCGAGGATATCCAACCCCTCCTCGAGCAGTGCCTGGCAGAACTGAACTGAGGCTTACAGGCCGAGTTCTTCCGGGGTAAGCATGTCGGACTCGAAG                                                                               <  5:222950/105‑1                                                                                                                   AGGCACTGCTCGAGGATATCCAACCCCTCCTCGAGCAGTGCCTGGCAGAACTGAACTGAGGCTTACAGGCCGAGTTCTTCCGGGGTAAGCATGTCGGACTCGAAG                                                                               >  6:222950/1‑105                                                                                                                        CTGCTCGAGGATATCCAACCCCTCCTCGAGCAGTGCCTGGCAGAACTGAACTGAGGCTTACAGGCCGAGTTCTTCCGGGGTAAGCATGTCGGACTCGAAGGCGATCCAGCCGCCTTCCAGTTCGGCATGGCCGTTGACGATCGGGCCG                               >  8:264970/1‑148                                                                                                                             CGAGGATATCCAACCCCTCCTCGAGCAGTGCCTGGCAGAACTGAACTGAGGCTTACAGGCCGAGTTCTTCCGGGGTAAGCATGTCGGACTCGAAGGCGATCCAGCCGCCTTCCAGTTCGGCATGGCCGTTGACGATCGGGCCGTAATAG                         >  8:235484/1‑149                                                                                                                               AGGATATCCAACCCCTCCTCGAGCAGTGCCTGGCAGAACTGAACTGAGGCTTACAGGCCGAGTTCTTCCGGGGTAAGCATGTCGGACTCGAAGGCGATCCAGCCGCCTTCCAGTTCGGCATGGCCGTTGACGATCGGGCCGTAATAGGT                       <  7:235484/149‑1                                                                                                                                              TCCTCGAGCAGTGACTGGCAGAACTGAACTGAGGCTTAGAGGCCGAGTTCTTACTGGTTAAGCATGTCGGACTCGAAGGCGATCCAGCCGCCTTCCAGTTCGGCATGGCCGTTGACGATCGTGCCGTAATAGGTCAGGCCGTTCTCCA         <  5:310079/148‑1                                                                                                                                                CTCGAGCAGTGCCTGGCAGAACTGAACTGAGGCTTACAGGCCGAGTTCTTCCGGGGTAAGCATGTCGGACTCGAAGGCGATCCAGCCGCCTTCCAGTTCGGCATGGCCGTTGACGATCGGGCCGTAATAGGTCAGGCCGTTCTCCAGGG      >  1:257912/1‑149                                                                                                                                                CTCGAGCAGTGCCTGGCAGAACTGAACTGAGGCTTACAGGCCGAGTTCTTCCGGGGTAAGCATGTCGGACTCGAAGGCGATCCAGCCGCCTTCCAGTTCGGCATGGCCGTTGACGATCGGGCCGTAATAGGTCAGGCCGTTCTCCAGGG      >  3:292685/1‑149                                                                                                                                                CTCGAGCAGTGCCTGGCAGAACTGAACTGAGGCTTACAGGCCGAGTTCTTCCGGGGTAAGCATGTCGGACTCGAAGGCGATCCAGCCGCCTTCCAGTTCGGCATGGCCGTTGACGATCGGGCCGTAATAGGTCAGGCCGTTCTCCAGGG      >  4:208083/1‑149                                                                                                                                                CTCGAGCAGTGCCTGGCAGAACTGAACTGAGGCTTACAGGCCGAGTTCTTCCGGGGTAAGCATGTCGGACTCGAAGGCGATCAAGCCGCCTTCCAGTTCGGCATGGCCGTTGACGATCGGGCCGTAATAGGTCAGGCCGTTCTCCAGGG      >  1:261204/1‑149                                                                                                                                                    AGCAGTGCCTGGCAGAACTGAACTGAGGCTTACAGGCCGAGTTCTTCCGGGGTAAGCATGTCGGACTCGAAGGCGATCCAGCCGCCTTCCAGTTCGGCATGGCCGTTGACGATCGGGCCGTAATAGGTCAGGCCGTTCTCCAGGGTTAC  >  6:118912/1‑149                                                                                                                                                                                                                                                                                                          ATTACGGCCCGATCGTCAACGGCCATGCCGAACTGGAAGGCGGCTGGATCGCCTTCGAGTCCGACATGCTTACCCCGGAAGAACTCGGCCTGTAAGCCTCAGTTCAGTTCTGCCAGGCACTGCTCGAGGATATCCAACCCCTCCTCGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4644482‑4644332 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcctcgagcaGTGCCTGGCAGAACTGAACTGAGGCTTACAGGCCGAGTTCTTCCGGGGTAAGCATGTCGGACTCGAAGGCGATCCAGCCGCCTTCCAGTTCGGCATGGCCGTTGACGATCGGGCCGTAATAGGTCAGGCCGTTCTCCAGGGTTAC  >  NC_002947/4644363‑4644507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.