New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4781897 = | 57 (1.170) | 3 (0.070) | 3/244 | NT | 5.5% | coding (5417/7887 nt) | pvdJ | non‑ribosomal peptide synthetase |
? | NC_002947 | 4781947 = | 50 (1.100) | coding (5367/7887 nt) | pvdJ | non‑ribosomal peptide synthetase |
CCGCGCTGCCGTTCGACCGCAGCGCCAGCGCCGAGCACAACCATGCAGCAGTGGCCGATGAGCTGGTGTACCTGACCCGCGAGCAAAGCGCGCAGGTGGCGCAGCGCGCCCAGGCGGCACAGTTGACGGTCAACACCCTGGTGCAAGGCGCCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4782053‑4781897 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctgggcGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATC > NC_002947/4781947‑4782093 tgGCGCTGCGGTCGAACGGCAGCGCCAGCGCCGAGCACAACCATGCAGCAGTGGCCGATGAGCTGGTGTACCTGACCCGCGAGCAAAGCGCGCAGGTGGCGCAGCGCGCCCAGGCGGCACAGTTGACGGTCAACACCCTGGTGCAAGGC > 8:249999/3‑149 GCGCTGCCGTTCGACCGCAGCGCCAGCGCCGAGCACAACCATGCAGCAGTGGCCGATGAGCTGGTGTACCTGACCCGCGAGCAAAGCGCGCAGGTGGCGCAGCGCGCCCAGGCGGCACAGTTGACGGTCAACACCCTGGTGCAAGGCGC < 6:20388/149‑1 GCTGCCGTTCGACCGCAGCGCCAGCGCCGAGCACAACCATGCAGCAGTGGCCGATGAGCTGGTGTACCTGACCCGCGAGCAAAGCGCGCAGGTGGCGCAGCGCGCCCAGGCGGCACAGTTGACGGTCAACACCCTGGTGCAAGGCGCCT > 4:88687/1‑149 GCTGCCGTTCGACCGCAGCGCCAGCGCCGAGCACAACCATGCAGCAGTGGCCAATGAGCTGGTGTACCTGACCCGCGAGCAAAGCGCGCAGGTGGCGCAGCGCGCCCAGGCGGCACAGTTGACGGTCAACACCCTGGTGCAAGGCGCCg > 1:231351/1‑148 GAGCACAACCATGCAGCAGTGGCCGATGAGCTGGTGTACCTGACCCGCGAGCAAAGCGCGCAGGTGGCGCAGCGCGCCCAGGCGGCACAGTTGACGGTCAACACCCTGGTGCAAGGCGCCT > 6:199847/1‑121 CAGGCGGCACAGTTGACGGTCAACACCCTGGTGCAAGGCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGC > 3:270239/1‑136 CAGGCGGCACAGTTGACGGTCAACACCCTGGTGCAAGGCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGC < 4:270239/136‑1 CACAGTTGACGGTCAACACCCTGGTGCAAGGCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTT > 2:42259/1‑109 GCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCCCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGACA > 8:195617/1‑149 gtGGCGCAGTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGA > 4:37899/3‑148 TGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCAGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGA > 1:41258/1‑148 GGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAA > 6:63545/1‑148 GCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATC < 1:63908/149‑1 CCGCGCTGCCGTTCGACCGCAGCGCCAGCGCCGAGCACAACCATGCAGCAGTGGCCGATGAGCTGGTGTACCTGACCCGCGAGCAAAGCGCGCAGGTGGCGCAGCGCGCCCAGGCGGCACAGTTGACGGTCAACACCCTGGTGCAAGGCGCCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4782053‑4781897 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctgggcGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATC > NC_002947/4781947‑4782093 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |