| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4825060 = | 54 (1.100) | 3 (0.060) | 3/250 | NT | 5.3% | coding (6130/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
| ? | NC_002947 | 4825107 = | 56 (1.200) | coding (6083/12954 nt) | pvdL | non‑ribosomal peptide synthetase | |||||
CCAACCGCATCCGCCCGGAAAGCGAAGGCCTGATCGGCGCTTTCCTCAACACCCAGGTGCTGCGCTGCGAGCTGGACGGCCAGATGACCGCCAGCGCGCTGCTGGAGCAGGTTCGCCAGGCTGCCATCGAAGGCCAGTCGCACCAGGACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4825212‑4825060‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgcTCCAGCAGCGCGCTGGCGGTCATCTGGCCGTCCAGCTCGCAGCGCAGCACCTGGGTGTTGAGGAAAGCGCCGATCAGGCCTTCGCTTTCCGGGCGGATGCGGTTGGCCACCGGCGCGCCGATACGCAGGTCGCGCTGGCCACTGTAAC > NC_002947/4825107‑4825254 CCAACCGCATCCGCCCGGAAAGCGAAGGCCTGATCGGCGCTTTCCTCAACACCCAGGTGCTGCGCTGCGAGCTGGACGGCCAGATGACCGCCAGCGCGCTGCTGGAGCAGGTTCGCCAGGCTGCCATCGAAGGCCAGTCGCACCAGGAC > 3:194293/1‑149CCAACCGCATCCGCCCGGAAAGCGAAGGCCTGATCGGCGCTTTCCTCAACACCCAGGTGCTGCGCTGCGAGCTGGACGGCCAGATGACCGCCAGCGCGCTGCTGGAGCAGGTTCGCCAGGCTGCCATCGAAGGCCAGTCGCACCAGGAC > 6:19750/1‑149 AACCGCATCCGCCCGGAAAGCGAAGGCCTGATCGGCGCTTTCCTCAACACCCAGGTGCTGCGCTGCGAGCTGGACGGCCAGATGACCGCCAGCGCGCTGCTGGAGCAGGTTCGCCAGGCTGCCATCGAAGGCCAGTCGCACCAGGACCT > 2:243609/1‑149 AACCGCATCCGCCCGGAAAGCGAAGGCCTGATCGGCGCTTTCCTCAACACCCAGGTGCTGCGCTGCGAGCTGGACGGCCAGATGACCGCCAGCGCGCTGCTGGAGCAGGTTCGCCAGGCTGCCATCGAAGGCCAGTCGCACCAGGACCT > 2:26626/1‑149 CCGCATCCGCCCGGAAAGCGAAGGCCTGATCGGCGCTTTCCTCAACACCCAGGTGCTGCGCTGCGAGCTGGACGGCCAGATGACCGCCAGCGCGCTGCTGGAGCAGGTTCGCCAGGCTGCCATCGAAGGCCAGTCGCACCAGGACCTG < 5:154440/148‑1 CCGCATCCGCCCGGAAAGCGAAGGCCTGATCGGCGCTTTCCTCAACACCCAGGTGCTGCGCTGCGAGCTGGACGGCCAGATGACCGCCAGCGCGCTGCTGGAGCAGGTTCGCCAGGCTGCCATCGAAGGCCAGTCGCACCAGGACCTG > 6:154440/1‑148 TGGAGCAGGTTCGCCAGGCTGCCATCGAAGGCCAGTCGCACCAGGACCTGCTCCAGCAGCGCGCTGGCGGTCATCTGGCCGTCCAGCTCGCAGCGCAGCACCTGGGTGTTGAGGAAAGCGCCGATCAGGCCTTCGCTTTCCGGGCGGA > 2:235942/1‑148 GAGCAGGTTCGCCAGGCTGCCATCGAAGGCCAGTCGCACCAGGACCTGCTCCAGCAGCGCGCTGGCGGTCATCTGGCCGTCCAGCTCGCAGCGCAGCACCTGGGTGTTGAGGAAAGCGCCGATCAGGCCTTCGCTTTCCGGGCGGATGC > 8:286331/1‑149 GAGCAGGTTCGCCAGGCTGCCATCGAAGGCCAGTCGCACCAGGACCTGCTCCAGCAGCGCGCTGGCGGTCATCTGGCCGTCCAGCTCGCAGCGCAGCACCTGGGTGTTGAGGAAAGCGCCGATCAGGCCTTCGCTTTCCGGGCGGA < 1:235942/146‑1 CCTGCTCCAGCAGCGCGCTGGCGGTCATCTGGCCGTCCAGCTCGCAGCGCAGCACCTGGGTGTTGAGGAAAGCGCTGATCAGGCCTTCGCTTTCCGGGCGGATGCGGTTGGTCAGCGGCGTGCCGATATGCAGGTCGCGCTGGCCACTG < 8:46314/149‑1 CCTGCTCCAGCAGCGCGCTGGCGGTCATCTGGCCGTCCAGCTCGCAGCGCAGCACCTGGGTGTTGAGGAAAGCGCCGATCAGGCCTTCGCTTTCCGGGCGGATGCGGTTGGCCACCGGCGCGCCGATACGCAGGTCGCGCTGGCCACTG > 3:259022/1‑149 CTGCTCCAGCAGCGCGCTGGCGGTCATCTGGCCGTCCAGCTCGCAGCGCAGCACCTGGGTGTTGAGGAAAGCGCCGATCAGGCCTTCGCTTTCCGGGCGGATGCGGTTGGCCACCGGCGCGCCGATACGCAGGTCGCGCTGGCCACTGT < 4:237444/149‑1 CTGCTCCAGCAGCGCGCTGGCGGTCATCTGGCCGTCCAGCTCGCAGCGCAGCACCTGGGTGTTGAGGAAAGCGCCGATCAGGCCTTCGCTTTCCGGGCGGATGCGGTTGGCCACCGGCGCGCCGATACGCAGGTCGCGCTGGCCACTG > 2:132533/1‑148 CTCCAGCAGCGCGCTGGCGGTCATCTGGCCGTCCAGCTCGCAGCGCAGCACCTGGGTGTTGAGGAAAGCGCCGATCAGGCCTTCGCTTTCCGGGCGGATGCGGTTGGCCACCGGCGCGCCGATACGCAGGTCGCGCTGGCCACTGTAAC < 1:56157/149‑1 CCAACCGCATCCGCCCGGAAAGCGAAGGCCTGATCGGCGCTTTCCTCAACACCCAGGTGCTGCGCTGCGAGCTGGACGGCCAGATGACCGCCAGCGCGCTGCTGGAGCAGGTTCGCCAGGCTGCCATCGAAGGCCAGTCGCACCAGGACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4825212‑4825060‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgcTCCAGCAGCGCGCTGGCGGTCATCTGGCCGTCCAGCTCGCAGCGCAGCACCTGGGTGTTGAGGAAAGCGCCGATCAGGCCTTCGCTTTCCGGGCGGATGCGGTTGGCCACCGGCGCGCCGATACGCAGGTCGCGCTGGCCACTGTAAC > NC_002947/4825107‑4825254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |