| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4860846 | 65 (1.330) | 4 (0.090) | 3/248 | NT | 6.3% | coding (204/2331 nt) | ligA | DNA ligase |
| ? | NC_002947 | = 4860907 | 57 (1.230) | coding (143/2331 nt) | ligA | DNA ligase | |||||
CGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4860692‑4860846‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaacACCCGCACCTGGTAACCCCCGACTCGCCCACCCAGCGTGTGGGTGGAGCTGCCTTGGCGGCGTTCAGCCAGGTACGCCACGAAGTGCCCATGCTCAGCCTGGGCAACGCCTTCGAAGAAGCCGACCTGCGTGAGTTCGGCCGTCGC < NC_002947/4860907‑4860762 CGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGG < 5:232017/149‑1CGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGCGCACTTCGTGGCGTACCTGG < 7:244686/149‑1 GCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCT > 5:230613/1‑149 GCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACACCCGCACCTGGTAACCCCCGACTCGCCCACCCAGCG > 1:207234/1‑149 GCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACACCCGCACCTGGTAACCCCCGACTCGCCCACCCAGCGTGTGGGTGGAGCTGCCTTGGCGGCGTTCAGCCA < 2:207234/149‑1 CCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACACCCGCACCTGGTAACCCCCGACTCGCCCACCCAGCGTGTGGGTGGAGCTGCCTTGGCGGCGTTCAGCCA < 8:229676/148‑1 CCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACACCCGCACCTGGTAACCCCCGACTCGCCCACCCAGCGTGTGGGTGGAGCTGCCTTGGCGGCGTTCAGC > 7:229676/1‑146 TGAACACCCGCACCTGGTAACCCCCGACTCGCCCACCCAGCGTGTGGGTGGAGCTGCCTTGGCGGCGTTCAGCCAGGTACGCCACGAAGTGCCCATGCTCAGCCTGGGCAACGCCTTCGAAGAAGCCGACCTGCGTGAGTTCGGCCGTC > 6:230613/1‑149 AACACCCGCACCTGGTAACCCCCGACTCGCCCACCCAGCGTGTGGGTGGAGCTGCCTTGGCGGCGTTCAGCCAGGTACGCCACGAAGTGCCCATGCTCAGCCTGGGCAACGCCTTCGAAGAAGCCGACCTGCGTGAGTTCGGCCGTCGC > 5:181587/1‑149 AACACCCGCACCTGGTAACCCCCGACTCGCCCACCCAGCGTGTGGGTGGAGCTGCCTTGGCGGCGTTCAGCCAGGTACGCCACGAAGTGCCCATGCTCAGCCTGGGCAACGCCTTCGAAGAAGCCGACCTGCGTGAGTTCGGCCGTCGC > 8:289666/1‑149 AACACCCGCACCTGGTAACCCCCGACTCGCCCACCCAGCGTGTGGGTGGAGCTGCCTTGGCGGCGTTCAGCCAGGTACGCCACGAAGTGCCCATGCTCAGCCTGGGCAACGCCTTCGAAGAAGCCGACCTGCGTGAGTTCGGCC > 5:248933/1‑144 AACACCCGCACCTGGTAACCCCCGACTCGCCCACCCAGCGTGTGGGTGGAGCTGCCTTGGCGGCGTTCAGCCAGGTACGCCACGAAGTGCCCATGCTCAGCCTGGGCAACGCCTTCGAAGAAGCCGACCTGCGTGAGTTCGGCC < 6:248933/144‑1 CGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4860692‑4860846‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaacACCCGCACCTGGTAACCCCCGACTCGCCCACCCAGCGTGTGGGTGGAGCTGCCTTGGCGGCGTTCAGCCAGGTACGCCACGAAGTGCCCATGCTCAGCCTGGGCAACGCCTTCGAAGAAGCCGACCTGCGTGAGTTCGGCCGTCGC < NC_002947/4860907‑4860762 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |