| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5197190 = | 59 (1.210) | 5 (0.110) | 5/250 | NT | 8.5% | coding (98/777 nt) | PP_4577 | hypothetical protein |
| ? | NC_002947 | 5197221 = | 52 (1.110) | coding (67/777 nt) | PP_4577 | hypothetical protein | |||||
GAGCTTGCCTGAAACCCGCGGCAAACAGCTGCAGGCGCGGTAAGGTAGGCATATGCACAACGACAAGGGAGACCGCGTGGTGGAACGCCTGCTACTCAATTGCGACATGGGCGAGAGTTTCGGCAGCTGGCGCATGGGCCTGGATGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5197339‑5197190‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgaAACTCTCGCCCATGTCGCAATTGAGTAGCAGGCGTTCCACCACGCGGTCTCCCTTGTCGTTGTGCATATGCCTACCTTACCGCGCCTGCAGCTGTTTGCCGCGGGTTTCAGGCAAGCTCAAGGCCGCCACGATCACAATGCCGTA > NC_002947/5197221‑5197365 GAGCTTGCCTGAAACCCGCGGCAAACAGCTGCAGGCGCGGTAAGGTAGGCATATGCACAACGACAAGGGAGACCGCGTGGTGGAACGCCTGCTACTCAATTGCGACATGGGCGAGAGTTTCGGCAGCTGGCGCATGGGCCTGGATGCC < 1:307526/148‑1GAGCTTGCCTGAAACCCGCGGCAAACAGCTGCAGGCGCGGTAAGGTAGGCATATGCACAACGACAAGGGAGACCGCGTGGTGGAACGCCTGCTACTCAATTGCGACATGGGCGAGAGTTTCGGCAGCTGGCGCATGGGCCTGGATGC < 7:210493/147‑1 AGTTTCGGCAGCTGGCGCATGGGCCTGGATGCCGAAACTCTCGCCCATGTCGCAATTGAGTAGCAGGCGTTCCACCACGCGGTCTCCC < 5:68229/88‑1 AGTTTCGGCAGCTGGCGCATGGGCCTGGATGCCGAAACTCTCGCCCATGTCGCAATTGAGTAGCAGGCGTTCCACCACGCGGTCTCCC > 6:68229/1‑88 GTTTCGGCAGCTGGCGCATGGGCCTGGATGCCGAAACTCTCGCCCATGTCGCAATTGAGTAGCAGGCGTTCCACCACGCGGTCTCCCTTGTCGTTGTGCATATGCCTACCTTACCGCGCCTGCAGCT < 1:233028/127‑1 GTTTCGGCAGCTGGCGCATGGGCCTGGATGCCGAAACTCTCGCCCATGTCGCAATTGAGTAGCAGGCGTTCCACCACGCGGTCTCCCTTGTCGTTGTGCATATGCCTACCTTACCGCGCCTGCAGCT > 2:233028/1‑127 CGGCAGCTGGCGCATGGGCCTGGATGCCGAAACTCTCGCCCATGTCGCAATTGAGTAGCAGGCGTTCCACCACGCGGTCTCCCTTGTCGTTGTGCATATGCCTACCTTACCGCGCCTGCAGCTGTTTGCCGCGGGTTTCAGGCAAGCT > 3:122658/1‑148 CCGAAACTCTCGCCCATGTCGCAATTGAGTAGGAGGCGTTCCACCACGCGGTCTCCCTTGTCGTTGTGCATATGCCTACCTTACCGCGCCTGCAGCTGTTTGCCGCGGGTTTCAGGCAAGCTCAAGGCCGCCACGATCAGAATGCCGTA < 4:108359/149‑1 CCGAAACTCTCGCCCATGTCGCAATTGAGTAGCAGGCGTTCCACCACGCGGTCTCCCTTGTCGTTGTGCATATGCCTACCTTACCGCGCCTGCAGCTGTTTGCCGCGGGTTTCAGGCAAGCTCAAGGCCGCCACGATCACAATGCCGT < 6:170172/148‑1 CGAAACTCTCGCCCATGTCGCAATTGAGTAGCAGGCGTTCCACCACGCGGTCTCCCTTGTCGTTGTGCATATGCCTACCTTACCGCGCCTGCAGCTGTTTGCCGCGGGTTTCAGGCAAGCTCAAGGCCGCCACGATCACAATGCCGTA < 5:174323/148‑1 GAGCTTGCCTGAAACCCGCGGCAAACAGCTGCAGGCGCGGTAAGGTAGGCATATGCACAACGACAAGGGAGACCGCGTGGTGGAACGCCTGCTACTCAATTGCGACATGGGCGAGAGTTTCGGCAGCTGGCGCATGGGCCTGGATGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5197339‑5197190‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgaAACTCTCGCCCATGTCGCAATTGAGTAGCAGGCGTTCCACCACGCGGTCTCCCTTGTCGTTGTGCATATGCCTACCTTACCGCGCCTGCAGCTGTTTGCCGCGGGTTTCAGGCAAGCTCAAGGCCGCCACGATCACAATGCCGTA > NC_002947/5197221‑5197365 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |