New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5482155 = | 60 (1.230) | 3 (0.060) | 3/250 | NT | 5.2% | coding (81/1014 nt) | dusB | tRNA dihydrouridine synthase DusB |
? | NC_002947 | 5482205 = | 52 (1.110) | coding (131/1014 nt) | dusB | tRNA dihydrouridine synthase DusB |
ATCGCCGCCGGCGATCTGCACCGAGCGTGGCTCGGGATCACCTTCATGGATGCGGCGCAGGCTCGACTTGCGGCTGTTCCACAGGCTCATGTCGCTGCTAACCATTTCCGACACCACCATACCGGCGCCCAGGCGCTGGCAAAGTGTACGGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5482308‑5482155 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggaaaTGGTTAGCAGCGACATGAGCCTGTGGAACAGCCGCAAGTCGAGCCTGCGCCGCATCCATGAAGGTGATCCCGAGCCACGCTCGGTGCAGATCGCCGGCGGCGATGCGCAGAT > NC_002947/5482205‑5482316 ATCGCCGCCGGCGATCTGCACCGAGCGTGGCTCGGGATCACCTTCATGGATGCGGCGCAGGCTCGACTTGCGGCTGTTCCACAGGCTCATGTCGCTGCTAACCATTTCCGACACCACCATACCGGCGCCCAGGCGCTGGCAAAGTGTAC < 2:230050/149‑1 CCGCCGGCGATCTGCACCGAGCGTGGCTCGGGATCACCTTCATGGATGCGGCGCAGGCTCGACTTGCGGCTGTTCCACAGGCTCATGTCGCTGCTAACCATTTCCGACACCACCATACCGGCGCCCAGGCGCTGGCAAAGTGTACGGA > 7:264986/1‑148 AACCATTTCCGACACCACCATACCGGCGCCCAGGCGCTGGCAAAGTGTACGGAAATGGTTAGCAGCGACATGAGCCTGTGGAACAGCCGCAAGTCGAGCCTGCGCCGCATCCATGAAGGTGATCCCGAGCCACGCTCGGTGCAGATCGC > 6:287542/1‑149 CCATTTCCGACACCACCATACCGGCGCCCAGGCGCTGGCAAAGTGTACGGAAATGGTTAGCAGCGACATGAGCCTGTGGAACAGCCGCAAGTCGAGCCTGCGCCGCATCCATGAAGGTGATCCCGAGCCACGCTCGGTGCAGATCGCCG > 6:276744/1‑149 CATACCGGCGCCCAGGCGCTGGCAAAGTGTACGGAAATGGTTAGCAGCGACATGAGCCTGTGGAACAGCCGCAAGTCGAGCCTGCGCCGCATCCATGAAGGTGATCCCGAGCCACGCTCGGTGCAGATCGCCGGCGGCGATGCGCAGAT < 5:287542/149‑1 ATCGCCGCCGGCGATCTGCACCGAGCGTGGCTCGGGATCACCTTCATGGATGCGGCGCAGGCTCGACTTGCGGCTGTTCCACAGGCTCATGTCGCTGCTAACCATTTCCGACACCACCATACCGGCGCCCAGGCGCTGGCAAAGTGTACGGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5482308‑5482155 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggaaaTGGTTAGCAGCGACATGAGCCTGTGGAACAGCCGCAAGTCGAGCCTGCGCCGCATCCATGAAGGTGATCCCGAGCCACGCTCGGTGCAGATCGCCGGCGGCGATGCGCAGAT > NC_002947/5482205‑5482316 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |