| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 5,681,415 | +CGGG | 94.8% | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681415 | 2 (0.040) | 35 (0.740) +CGGG |
33/254 | NT | 94.8% | intergenic (‑133/+71) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | 5681416 = | 2 (0.040) | intergenic (‑134/+70) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
TTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5681268‑5681415‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTG > NC_002947/5681416‑5681563 |||| TTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCC > 2:186548/1‑149 ACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGG < 3:265273/148‑1 ACCGTAATACATGCAAACACAGACCTCCGGCGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGG < 8:248375/148‑1 CATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCG < 1:156519/149‑1 CATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCG > 6:299428/1‑149 CAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGTCCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAG < 1:242141/149‑1 AAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCC < 8:6867/149‑1 CAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATC < 1:186548/149‑1 GACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGC < 2:89501/149‑1 CTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCG > 8:168493/1‑123 CTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCG < 7:168493/123‑1 CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTTTAGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTAATTGCCACTGCATGAACCGCCCGGGCTGCTGCGCAGCCCTATCGCGACAC > 5:63495/1‑148 CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACAC > 1:51106/1‑148 AGGTGGGCTGGGTTCTTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGG < 1:257841/149‑1 AGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAA < 5:299428/147‑1 gTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGTAAGGG‑GCGCGAAGCGGCCCCAGGCTTTGATTGGCACTGCATGAACCGCCGGGGCTGCTGCGCCGCCCTATAGGGCCAAAAAGCCGCGCC > 1:161170/2‑149 TGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATAGCGACACAAGGCCGCTCCC > 5:259272/1‑149 CTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCACAGGCATTCATTGCCACTGCATGAACCGCCGGGGCAGCTGCGCACCCCTATCGCGACACAACGCCGCTACCCCTCCA‑G > 5:248134/1‑149 GATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCCCTCCA‑GACCCCCAGGCCCT > 7:292445/1‑149 TGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGGCGCGAAAGGG‑GCGCTAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTG < 7:281874/148‑1 GAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATAGCGCCACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACCTCCTAACC > 1:28621/1‑147 GCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGT > 7:167348/1‑147 TTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGT > 2:205378/1‑149 TGTCGCTAATGGG‑GCGCTAAGCGGCCCCTGGCTTTAATTGCCACTGAATTAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGAAAAAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGC < 6:259272/149‑1 GTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCT > 4:44992/1‑131 GTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCT < 3:44992/131‑1 TCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGT > 4:205127/1‑144 TCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGT < 3:205127/144‑1 CGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATC < 1:205378/149‑1 GAAAGGG‑GCGCGAAGGGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCC < 7:232369/149‑1 AAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCG < 2:51106/148‑1 G‑GCGCTAAGCGGCCCCAGGCTTTCATTGCACCTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTAGCGCGACACATGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCA < 8:292445/149‑1 CCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCACGACCACCAGGCCCTGCGCCTCACATCCTAACCAAG < 1:201163/114‑1 CCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAG > 2:201163/1‑113 TCATTCCCAGTGCACTACCCGCCGGGCCTGCTGCCCAGCCCAATCGCAAAAAATGCCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTATCCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATG < 7:125012/146‑1 CATTGCCACTGCATGACCCCCCGGGGGGGCTGCGCAGCCATATCGCGACAAATGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGA < 6:248134/148‑1 CATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > 3:172627/1‑149 ATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACAACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATACGCGTCACGCACCAGCCTTTCCAATGCGAC > 7:90659/1‑148 CACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTC < 4:172627/149‑1 CTGCATGACCCGCCGGGGCTTCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCG < 2:28621/149‑1 CGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGC > 8:44389/1‑149 GGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACACACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTG < 1:271195/149‑1 |||| TTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑GCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5681268‑5681415‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCA‑GACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTG > NC_002947/5681416‑5681563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |