New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5873510 =	49 (1.000)	6 (0.130)	3/248	NT	11.3%	coding (215/657 nt)	PP_5147	haloacid dehalogenase‑like family hydrolase
	?	NC_002947	5873556 =	48 (1.040)					coding (261/657 nt)	PP_5147	haloacid dehalogenase‑like family hydrolase

GGGCGATCGGTGCGGTGACGAAGCGGTTGGTAGCGGTGATGATCACCAGCTGGTCGCCCGCCTCGCGGTGCTGCTGCAGCAAGGCCAGGGCCTTGGGCAGGACGATGGGCTCGATGCAGTCGCGCATGAAGTCGCGGTGCCACTCGTCGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5873662‑5873510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgagccCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAG  >  NC_002947/5873556‑5873703                                                                                                                                                                                                                                                                                                               GGGCGATCGGTGCGGTGACGAAGCGGTTGGTAGCGGTGATGATCACCAGCTGGTCGCCCGCCTCGCGGTGCTGCTGCAGCAAGGCCAGGGCCTTGGGCAGGACGATGGGCTCGATGCAGTCGCGCATGAAGTCGCGGTGCCACTCGTCG                                                                                                                                                          <  1:125442/149‑1                                                                                                        GATGGGCTCGATGCAGTCGCGCATGAAGTCGCGGTACCACTCGTCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCCCC                                                   >  1:152741/1‑149                                                                                                             GCTCGATGCAGTCGCGCATGAAGTCGCGGTGCCACTCGTCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCG                                              >  1:279989/1‑149                                                                                                             GCTCGATGCAGTCGCGCATGAAGTCGCGGTGCCACTCGTCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCG                                              >  3:90007/1‑149                                                                                                             GCTCGATGCAGTCGCGCATGAAGTCGCGGTGCCACTCGTCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCG                                              >  3:94253/1‑149                                                                                                                   TGCAGTCGCGCATGAAGTCGCGGTGCCACTCGTCGAGCCCATCGTCCTGCCCAAGTCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGC                                        <  4:90007/149‑1                                                                                                                   TGCAGTCGCGCATGAAGTCGCGGTGCCACTCGTCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACAAACCGCTTCGTCACCGCACCGATCGCCCGGC                                        <  4:94253/149‑1                                                                                                                                                     GAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAAT       <  5:1480/148‑1                                                                                                                                                       GCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCGGGGGGTGCGGGTGTTGCTGGCAACCGAATGCG    >  5:169939/1‑149                                                                                                                                                         CCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAG  <  5:56097/149‑1                                                                                                                                                                                                                                                                                                               GGGCGATCGGTGCGGTGACGAAGCGGTTGGTAGCGGTGATGATCACCAGCTGGTCGCCCGCCTCGCGGTGCTGCTGCAGCAAGGCCAGGGCCTTGGGCAGGACGATGGGCTCGATGCAGTCGCGCATGAAGTCGCGGTGCCACTCGTCGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5873662‑5873510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgagccCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAG  >  NC_002947/5873556‑5873703

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.