| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5925322 | 53 (1.080) | 4 (0.090) | 4/250 | NT | 7.0% | coding (823/1083 nt) | gcvT‑II | aminomethyltransferase |
| ? | NC_002947 | = 5925345 | 55 (1.180) | coding (800/1083 nt) | gcvT‑II | aminomethyltransferase | |||||
CCACTGGTGATCTCCCCTTCGCCAATGCCGGCTACACGCACGACCTGATGGGCGCGCAGTACACCGCGCTCTTCCAGCACCAGACCCACCAGCTTTTCCTGCACGCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5925213‑5925322‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtgTCGGCCTGCTTGCGGAAATCGAGCACGGCGTGCAGGAAAAGCTGGTGGGTCTGGTGCTGGAAGAGCGCGGTGTACTGCGCGCCCATCAGGTCGTGCGTGTAGCCGGCATTGGCGAAGGGGAGATCACCAGTGGTAGTTTCTCGC < NC_002947/5925345‑5925202 CCACTGGTGATCTCCCCTTCGCCAATGCCGGCTACACGCACGACCTGATGGGCGCGCAGTACACCGCGCTCTTCCAGCACCAGACCCACCAGCTTTTCCTGCACGCCGTGTCGGCCTGCTTGCGGAAATCGAGCACGGCGTG > 1:230108/1‑142CCACTGGTGATCTCCCCTTCGCCAATGCCGGCTACACGCACGACCTGATGGGCGCGCAGTACACCGCGCTCTTCCAGCACCAGACCCACCAGCTTTTCCTGCACGCCGTGTCGGCCTGCTTGCGGAAATCGAGCACGGCGTG < 2:230108/142‑1 CCCTTCGCCAATGCCGGCTACACGCACGACCTGATGGGCGCGCAGTACACCGCGCTCTTCCAGCACCAGACCCACCAGCTTTTCCTGCACGCCGTGTCGGCCTGCTTGCGGAAATCGAGCACGGC > 1:158343/1‑125 CCCTTCGCCAATGCCGGCTACACGCACGACCTGATGGGCGCGCAGTACACCGCGCTCTTCCAGCACCAGACCCACCAGCTTTTCCTGCACGCCGTGTCGGCCTGCTTGCGGAAATCGAGCACGGC < 2:158343/125‑1 CCGTGTCGGCCTGCTTGCGGAAATCGAGCACGGCGTGCAGGAAAAGCTGGTGGGTCTGGTGCTGGAAGAGCGCGGTGTACTGCGCGCCCATCAGGTCGTGCGTGTAGCCGGCATTGGCGAAGGGGAGATCACCAGTGGTAGTTTCTCGC < 5:127101/149‑1 CCACTGGTGATCTCCCCTTCGCCAATGCCGGCTACACGCACGACCTGATGGGCGCGCAGTACACCGCGCTCTTCCAGCACCAGACCCACCAGCTTTTCCTGCACGCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5925213‑5925322‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtgTCGGCCTGCTTGCGGAAATCGAGCACGGCGTGCAGGAAAAGCTGGTGGGTCTGGTGCTGGAAGAGCGCGGTGTACTGCGCGCCCATCAGGTCGTGCGTGTAGCCGGCATTGGCGAAGGGGAGATCACCAGTGGTAGTTTCTCGC < NC_002947/5925345‑5925202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |