| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5972761 = | 60 (1.230) | 3 (0.060) | 3/250 | NT | 5.1% | coding (50/288 nt) | PP_5725 | hypothetical protein |
| ? | NC_002947 | 5972798 = | 55 (1.180) | coding (87/288 nt) | PP_5725 | hypothetical protein | |||||
ATTAAAAATTCTTCATGACTTGTACAGGAGGGCGTGGTTGGATCACCTACAATAACCAGTTCACCACCTACCACCACACTATTGACGATATGCGCATTCAACACATCAAACTTGCCGCGCTGATTGGCCGTCATGGGCGTATCGGCCTTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5972914‑5972761‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcgCGGCAAGTTTGATGTGTTGAATGCGCATATCGTCAATAGTGTGGTGGTAGGTGGTGAACTGGTTATTGTAGGTGATCCAACCACGCCCTCCTGTACAAGTCATGAAGAATTTTTAATGTCTCAGGCAGAAGGATCCATCATCTACTT > NC_002947/5972798‑5972944 ATTAAAAATTCTTCATGACTTGTACAGGAGGGCGTGGTTGGATCACCTACAATAACCAGTTCACCACCTACCACCACACTATTGACGATATGCGCATTCAACACATCAAACTTGCCGCGCTGATTGGCCGTCATGGGCGTATCGGCCTT < 8:51287/149‑1 AAAATTCTTCATGACTTGTACAGGAGGGCGTGGTTGGATCACCTACAATAACCAGTTCACCACCTACCACCACACTATTGACGATATGCGCATTCAACACATCAAACTTGCCGCGCTGATTGGCCGTCATGGGCGTATCGGCCTTCAGC < 5:107217/149‑1 AAATTCTTCATGACTTGTACAGGAGGGCGTGGTTGGATCACCTACAATAACCAGTTCACCACCTACCACCACACTATTGACGATATGCGCATTCAACACATCAAACTTGCCGCGCTGATTGGCCGTCATGGGCGTATCGGCCTTCAGC > 3:269310/1‑148 AATTCTTCATGACTTGTACAGGAGGGCGTGGTTGGATCACCTACAATAACCAGTTCACCACCTACCACCACACTATTGACGATATGCGCATTCAACACATCAAACTTGCCGCGCTGATTGGCCGTCATGGGCGTATCGGCCTTCAGCG > 6:222442/1‑148 CGCGCTGATTGGCCGTCATGGGCGTATCGGCCTTCAGCGCGGCAAGTTTGATGTGTTGAATGCGCATATCGTCAATAGTGTGGTGGTAGGTGGTGAACTGGTTATTGTAGGTGATCCAACCACGCCCTCCTGTACAAGTCATGAAGAAT > 2:51131/1‑149 GCGCTGATTGGCCGTCATGGGCGTATCGGCCTTCAGCGCGGCAAGTTTGATGTGTTGAATGCGCATATCGTCAATAGTGTGGTGGTAGGTGGTGAACTGGTTATTGTAGGTGATCCAACCACGCCCTCCTGTACAAGTCAT < 3:58076/141‑1 GCGCTGATTGGCCGTCATGGGCGTATCGGCCTTCAGCGCGGCAAGTTTGATGTGTTGAATGCGCATATCGTCAATAGTGTGGTGGTAGGTGGTGAACTGGTTATTGTAGGTGATCCAACCACGCCCTCCTGTACAAGTCAT > 4:58076/1‑141 CGCGGCAAGTTTGATGTGTTGAATGCGCATATCGTCAATAGTGTGGTGGTAGGTGGTGAACTGGTTATTGTAGGTGATCCAACCACGCCCTCCTGTACAAGTCATGAAGAATTTTTAATGTCTCAGGCAGAAGGATCCATCATCTACTT < 8:155900/149‑1 ATTAAAAATTCTTCATGACTTGTACAGGAGGGCGTGGTTGGATCACCTACAATAACCAGTTCACCACCTACCACCACACTATTGACGATATGCGCATTCAACACATCAAACTTGCCGCGCTGATTGGCCGTCATGGGCGTATCGGCCTTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5972914‑5972761‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcgCGGCAAGTTTGATGTGTTGAATGCGCATATCGTCAATAGTGTGGTGGTAGGTGGTGAACTGGTTATTGTAGGTGATCCAACCACGCCCTCCTGTACAAGTCATGAAGAATTTTTAATGTCTCAGGCAGAAGGATCCATCATCTACTT > NC_002947/5972798‑5972944 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |