New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6069118 =50 (1.020)3 (0.060) 3/254 NT 6.4% coding (490/897 nt) PP_5323 M23/M37 family peptidase
?NC_002947 6069204 = 39 (0.820)coding (404/897 nt) PP_5323 M23/M37 family peptidase

GCAGATGCTCAGTGTGCTCAGGGGGCGGCCCGGGCTGCTGCTGAACTACCGTTCGACCCTGCTGCAGGCCATGGGTGACCCGGGCAAACGGCCCCAGGGCTTCCGCTATGCGTTCCCGTGGATTGGCGGGCCGTTCCGCGTCACTCAGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6069269‑6069118
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTGCAGCAGGGTCGAACGGTAGTTCAGCAGCAGCCCGGGCCGCCCCCTGAGCACACTGAGCATCTGCGTGGTGCGCGGCGGCAGCAGCCGGCGCACGATACGCGGGGCATCGCCGCCTTGTGCGTTGACCAGGTTGTCCAGCCGCAAC  >  NC_002947/6069204‑6069350
                                                                                                                                                                                                                                                                                                           
GCAGATGCTCAGTGTGCTCAGGGGGCGGCCCGGGCTGCTGCTGAACTACCGTTCGACCCTGCTGCAGGCCATGGGTGACCCGGGCAAACGGCCCCAGGGCTTCCGCTATGCGTTCCCGTGGATTGGCGGGCCGTTCCGCGTCACTCAGG                                                                                                                                                        >  5:267249/1‑149
 CAGATGCTGAGTGTGCTCAGGGGGCGGCCCGGGCTTCTGCTGAACTACCGTTCGACCCTGCTGCAGTCCATGGGTGACCCGGGCAAACGGCCCCAGGGCTTCCGCTATGCGTTCCCGTGGATTGGCGGGCCGTTCCGCGTCACTCAGGG                                                                                                                                                       <  7:268749/149‑1
   GATGCTCAGTGTGCTCAGGGGGCGGCCCGGGCTGCTGCTGAACTACCGTTCGACCCTGCTGCAGGCCATGGGTGACCCGGGCAAACGGCCCCAGGGCTTCCGCTATGCGTTCCCGTGGATTGGCGGGCCGTTCCGCGTCACTCAGGGCC                                                                                                                                                     >  5:156836/1‑149
                                                              TGCAGGCCATGGGTGACCCGGGCAAACGGCCCCAGGGCTTCCGCTATGCGTTCCCGTGGATTGGCGGGCCGTTCCGCGTCACTCAGGGCCTGCAGCAGGGTCGAACGGTAGTTCAGCAGCAGCCCGGGCCGCCCCCTGAGCACACTGAG                                                                                          >  8:252806/1‑149
                                                                   GCCATGGGTGACCCGGGCAAACGGCCCCAGGGCTTCCGCTATGCGTTCCCGTGGATTGGCGGGCCGTTCCGCGTCACTCAGGGCCTGCAGCAGGGTCGAACGGTAGTTCAGCAGCAGCCCGGGCCGCCCCCTGAGCACACTGAGCATCT                                                                                     >  4:90732/1‑149
                                                                         GGTGACCCGGGCAAACGGCCCCAGGGCTTCCGCTATGCGTTCCCGTGGATTGGCGGGCCGTTCCGCGTCACTCAGGGCCTGCAGCAGGGTCGAACGGTAGTTCAGCAGCAGCCCGGGCCGCCCCCTGAGCACACTGAGCATCTGCGTG                                                                                <  3:90732/148‑1
                                                                                                                                                      CCTGCAGCAGGGTCGAACGGTAGTTCAGCAGCAGCCCGGGCCGCCCCCTGAGCACACTGAGCATCTGCGTGGTGCGCGGCGGCAGCAGCCGGCGCACGATACGCGGGGCATCGCCGCCTTGTGCGTTGACCAGGTTGTCCAGCCGCAAC  >  8:84979/1‑149
                                                                                                                                                                                                                                                                                                           
GCAGATGCTCAGTGTGCTCAGGGGGCGGCCCGGGCTGCTGCTGAACTACCGTTCGACCCTGCTGCAGGCCATGGGTGACCCGGGCAAACGGCCCCAGGGCTTCCGCTATGCGTTCCCGTGGATTGGCGGGCCGTTCCGCGTCACTCAGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6069269‑6069118
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTGCAGCAGGGTCGAACGGTAGTTCAGCAGCAGCCCGGGCCGCCCCCTGAGCACACTGAGCATCTGCGTGGTGCGCGGCGGCAGCAGCCGGCGCACGATACGCGGGGCATCGCCGCCTTGTGCGTTGACCAGGTTGTCCAGCCGCAAC  >  NC_002947/6069204‑6069350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.