New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 6096455 | 49 (1.000) | 3 (0.070) | 3/246 | NT | 5.9% | coding (243/1416 nt) | pycA | pyruvate carboxylase subunit A |
? | NC_002947 | = 6096480 | 50 (1.090) | coding (218/1416 nt) | pycA | pyruvate carboxylase subunit A |
GTGCCCGGGGTTACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6096300‑6096455 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaaaccgGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTTTCGGAAAACGCTGAACTGGCAGAAATTTGCGCCGAGCGCGGGATCAAGTTCATCGGCCCGGCCGCCGACGTGATTCGCCGTATGGGCGACAAGACCGAAGCGCGCCGCACCAT < NC_002947/6096480‑6096333 GTGCCCGGGGTTACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG > 2:119251/1‑149 CCCGGGGTTACCGGCACACCGGCGGTGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAAGTTCTGCCAGTTCAGCGTTTTCCGAAAGGA > 5:309622/1‑148 CCCGGGGTTACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGA > 5:153408/1‑148 GTTACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAACCG > 3:59952/1‑147 CGCGTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAACCGGCTGTTATGCCCTGCACCCAGGCTACGGTTTCCTTTC < 4:72080/149‑1 GCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAACCGGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTT > 3:160384/1‑146 GCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAACCGGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTT < 4:160384/146‑1 GAAACCGGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTTTCGGAAAACGCTGAACTGGCAGAAATTTGCGCCGAGCGCGGGATCAAGTTCATCGGCCCGGCCGCCGACGTGATTCGCCGTATGGGCGACAAGACCGAAGCGCGCCG > 5:216533/1‑149 AAACCGGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTTTCGGAAAACGCTGAACTGGCAGAAATTTGCGCCGAGCGCGGGATCAAGTTCATCGGCCCGGCCGCCGACGTGATTCGCCGTATGGGCGACAAGACCGAAGCGCGCCGC < 2:254865/149‑1 AAACCGGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTTTCGGAAAACGCTGAACTGGCAGAAATTTGCGCCGAGCGCGGGATCAAGTTCATCGGCCCGGCCGCCGACGTGATTCGCCGTATGGGCGACAAGACCGAAGCGCGCCG > 4:120763/1‑148 GGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTTTCGGAAAACGCTGAACTGGCAGAAATTTGCGCCGAGCGCGGGATCAAGTTCATCGGCCCGGCCGCCGACGTGATTCGCCGTATGGGCGACAAGACCGAAGCGCGCCGCACCAT < 5:304261/149‑1 GTGCCCGGGGTTACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGGAAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6096300‑6096455 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaaaccgGCTGTGATGCCCTGCACCCAGGCTACGGTTTCCTTTCGGAAAACGCTGAACTGGCAGAAATTTGCGCCGAGCGCGGGATCAAGTTCATCGGCCCGGCCGCCGACGTGATTCGCCGTATGGGCGACAAGACCGAAGCGCGCCGCACCAT < NC_002947/6096480‑6096333 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |