New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	307756 =	47 (0.960)	3 (0.070)	3/246	NT	6.7%	intergenic (+771/‑1098)	hslO/PP_0254	molecular chaperone HslO/hypothetical protein
	?	NC_002947	307795 =	39 (0.850)					intergenic (+810/‑1059)	hslO/PP_0254	molecular chaperone HslO/hypothetical protein

TGCGAGCCTGAGCGTGACGGCACCAACTCCGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAG‑CGTTACCTGATCGGTGACGACGAGCACGGTTGGG  >  NC_002947/307612‑307899                                                                                                                                                 |                                                                                                                                                 tgCGAGCCTGAGCGTGACGGCACCAACTCCGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCGGCTCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTGCCTGCTGCCGGCTGCCGa                                                                                                                                              >  5:89579/1‑149 (MQ=255)  tagcagccgccttccatgttgaagacaacgccttcgccccaaccgtgctcgtcgtcacccatcaggtaacggctttcgtcagccgaaagggtagtcttgccagtgccggacaggccgaagaacaaggtcacatcgccttcttcGCCgaa                                                                                                                                             <  3:174183‑M1/6‑2 (MQ=255)   cGAGCCTGAGCGTGACGGCACCAACTCCGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATg                                                                                                                                            <  2:287220/149‑1 (MQ=255)    gcagccgccatccatgttgaagacaacgccttcgccccaaccgtgctcgtcgtcaccgatcaggtaacggctttcgtcagccgaaagggtagtcttgccagtgccggacaggccgaagaacaaggtcacatcgccttcttcGCCGATGt                                                                                                                                           >  5:93809‑M1/142‑149 (MQ=255)        cTGAGCGTGACGGCACCAACTCCGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTg                                                                                                                                       >  3:196292/1‑149 (MQ=255)           aGCGTGACGGCACCAACTCCGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGc                                                                                                                                      <  3:111308/147‑1 (MQ=255)           aGCGTGACGGCACCAACTCCGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCt                                                                                                                                    <  4:298863/149‑1 (MQ=255)             cGTGACGGCACCAACTCCGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTAt                                                                                                                                  <  3:154659/149‑1 (MQ=255)              gTGACGGCACCAACTCCGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATg                                                                                                                                 >  2:233378/1‑149 (MQ=255)                 aCGGCACCAACTCCGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCa                                                                                                                               <  5:291126/148‑1 (MQ=255)                    ggcacAACTCCGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCAGACTGCCGATGTACTGCCTATGCACTgc                                                                                                                           >  8:167084/5‑149 (MQ=255)                         aaCTCCGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGAt                                                                                                                                             >  5:70963/1‑126 (MQ=255)                         aaCTCCGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGAt                                                                                                                                             <  6:70963/126‑1 (MQ=255)                            tCCGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCaa                                                                                                                   >  3:220862/1‑149 (MQ=255)                              cGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTgctgccggctgccg                                                                                                                                               <  2:239736/119‑1 (MQ=255)                              cGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTgctgccggctgccg                                                                                                                                               >  1:239736/1‑119 (MQ=255)                              cGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACa                                                                                                                 >  4:294961/1‑149 (MQ=255)                                aCGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATc                                                                                                               >  2:195747/1‑149 (MQ=255)                                  ggTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCgg                                                                                                             <  3:294961/149‑1 (MQ=255)                                           atcatcAACTTCTCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGaagaag                                                                                                     <  3:33638/148‑1 (MQ=255)                                            tcatcaACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGc                                                                                                   >  3:154348/1‑149 (MQ=255)                                               tcaACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGAt                                                                                                >  2:157750/1‑149 (MQ=255)                                                caACTTCGCTCAGAAGAAAGTGATGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGAtg                                                                                               >  1:258446/1‑149 (MQ=255)                                                    ttCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGAc                                                                                           >  6:212227/1‑149 (MQ=255)                                                    ttCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGAc                                                                                           >  7:45640/1‑149 (MQ=255)                                                      cGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGAc                                                                                           <  3:47122/147‑1 (MQ=255)                                                        tcaccgatcaggtaacggctttcgtcagccgaaagggtagtcttgccagtgccggacaggccgaagaacaaggtcacatcgccttcttcGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCgg                                                                                                             <  3:16189‑M1/38‑1 (MQ=255)                                                        tcaccgatcaggtaacggctttcgtcagccgaaagggtagtcttgccagtgccggacaggccgaagaacaaggtcacatcgccttcttcGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCgg                                                                                                             >  4:16189‑M1/90‑127 (MQ=255)                                                         tCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGCCGAAGAAGGCGATGTGACCTTGt                                                                                      >  5:251320/1‑149 (MQ=255)                                                         tCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCAGATGTACTGCCTATGAACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGt                                                                                      >  6:229507/1‑149 (MQ=255)                                                           agaagaAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGttc                                                                                    >  4:48779/1‑149 (MQ=255)                                                           agaagaAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGttc                                                                                    >  3:211391/1‑149 (MQ=255)                                                              agaaAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGttcttc                                                                                 <  4:196292/149‑1 (MQ=255)                                                                       tGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTcc                                                                        >  6:2567/1‑149 (MQ=255)                                                                        gATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCgaag                                                                                                        >  1:211491/1‑116 (MQ=255)                                                                        gATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCgaag                                                                                                        <  2:211491/116‑1 (MQ=255)                                                                         aTCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCgg                                                                      <  1:233378/149‑1 (MQ=255)                                                                         aTCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCgg                                                                      <  5:212227/149‑1 (MQ=255)                                                                           tttcgtcagccgaaagggtagtcttgccagtgccggacaggccgaagaacaaggtcacatcgccttcttcGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGc                                                                                                            >  8:48470‑M1/71‑109 (MQ=255)                                                                            gCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCAc                                                                   <  5:2567/149‑1 (MQ=255)                                                                                gCACGCGCTACGCCGGCGAACTGAAGCAAGCCATGTGCTCGGTGCAGACCTTCCTCCTGCCGGCGGCCGATCTACTGCCTAGGCACTGCGCGGCCAACCTCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGc                                                               <  6:89579/149‑1 (MQ=255)                                                                                   tGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCtt                                                                                        <  1:254695/121‑1 (MQ=255)                                                                                   tGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCtt                                                                                        >  2:254695/1‑121 (MQ=255)                                                                                     cgcTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGAc                                                          <  8:205842/149‑1 (MQ=255)                                                                                              ggCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTc                                                 <  4:211391/149‑1 (MQ=255)                                                                                               gCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCg                                                <  4:154348/149‑1 (MQ=255)                                                                                                cGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCgg                                               <  8:45640/149‑1 (MQ=255)                                                                                                  aaaTGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTCCTGCCGGCTTCAGATGTACTGCCTATGCACTGCGCGGACAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCt                                             >  1:19504/1‑149 (MQ=255)                                                                                                    aTGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGa                                           <  1:195747/149‑1 (MQ=255)                                                                                                        agaaAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCtt                                                                                        <  3:159609/100‑1 (MQ=255)                                                                                                        agaaAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCtt                                                                                        >  4:159609/1‑100 (MQ=255)                                                                                                                aTGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAG‑ccgtta                              >  2:23661/1‑144 (MQ=255)                                                                                                                        ggTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAGCCGTTACCTGATCg                       >  7:196052/1‑149 (MQ=255)                                                                                                                            cAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAGCCGTTACCTGATCGGTg                    <  3:48779/148‑1 (MQ=255)                                                                                                                                           ccggctgccgATGTACTGCCTATGCAATGCGCGGCCAACATGGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGtt     <  2:258446/148‑1 (MQ=255)                                                                                                                                             ggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTggg  <  1:301245/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                 TGCGAGCCTGAGCGTGACGGCACCAACTCCGACGGTTGCGTGATCATCAACTTCGCTCAGAAGAAAGTGCTGATCGCTGGCATGCGCTACGCCGGCGAAATGAAGAAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAG‑CGTTACCTGATCGGTGACGACGAGCACGGTTGGG  >  NC_002947/307612‑307899

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.