New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1855432 =50 (1.020)3 (0.070) 3/238 NT 6.8% coding (444/1341 nt) PP_1659 hypothetical protein
?NC_002947 1855485 = 37 (0.830)coding (497/1341 nt) PP_1659 hypothetical protein

CCCAAGGGTCAGAAACCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCATCGCTTTCGCC  >  NC_002947/1855286‑1855576
                                                                                                                                                  |                                                                                                                                                
ccaggccgacttgaccatgatcgcgccgacctgctgggtcttttgcgaaccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCt                                                                                                                                                <  3:174079‑M1/3‑1 (MQ=255)
 ccAAGGGTCAGAAACCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTg                                                                                                                                               >  5:55870/1‑149 (MQ=255)
  aggccgacttgaccatgatcgcgccgacctgctgggtcttttgcggaccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTgg                                                                                                                                              >  3:300520‑M1/145‑149 (MQ=255)
  aggccgacttgaccatgatcgcgccgacctgctgggtcttttgcgaaccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTgg                                                                                                                                              >  4:174079‑M1/145‑149 (MQ=255)
   ggccgacttgaccatgatcgcgccgacctgctgggtcttttgcgaaccgcaggtgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTGGt                                                                                                                                             >  3:208732‑M1/144‑149 (MQ=255)
   aaGGGTCAGAACCCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGAACGGCCCGCTGGt                                                                                                                                             >  7:232252/1‑149 (MQ=255)
    gccgacttgaccatgatcgcgccgacctgctgggtcttttgcgaaccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTg                                                                                                                                               <  4:47838‑M1/4‑1 (MQ=255)
    gccgacttgaccatgatcgcgccgacctgctgggtcttttgcgaaccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTg                                                                                                                                               >  3:47838‑M1/143‑146 (MQ=255)
    gccgacttgaccatgatcgcgccgacctgctgggtcttttgcgaaccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTGGtt                                                                                                                                            <  4:210935‑M1/7‑1 (MQ=255)
       ggcAGAAACCCGTCGCCTGGGACCAGCCGGCGCCCGTGCCCGCGGCCTGCCAAGGCACGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGGTCAAGACCGGCCCGCTGGTTGAc                                                                                                                                         <  3:174387/147‑1 (MQ=255)
       gTCAGAAACCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGAc                                                                                                                                         >  8:113337/1‑149 (MQ=255)
          ttgaccatgatcgcgccgacctgctgggtcttttgcgaaccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctatacaggccattgttgacgatgtcatcgaacatcgGCTGGTTGACCa                                                                                                                                       <  7:169848‑M1/12‑1 (MQ=255)
                   tCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACt                                                                                                                             <  6:232301/149‑1 (MQ=255)
                      ccTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTac                                                                                                                          <  6:222082/149‑1 (MQ=255)
                      ccTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTa                                                                                                                           >  5:142692/1‑148 (MQ=255)
                       cTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTaca                                                                                                                         >  4:43162/1‑149 (MQ=255)
                            aCCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACAcgcg                                                                                                                     >  7:105237/1‑148 (MQ=255)
                                       cccGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCAt                                                                                                         >  2:261936/1‑149 (MQ=255)
                                              ccGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACgcgc                                                                                                                    <  1:284684/131‑1 (MQ=255)
                                              ccGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACgcgc                                                                                                                    >  2:284684/1‑131 (MQ=255)
                                              ccGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAAc                                                                                                  <  6:142692/149‑1 (MQ=255)
                                              ccGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAAc                                                                                                  >  5:40674/1‑149 (MQ=255)
                                                 ccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctatacaggccattgttgacgatgtcatcgaacatcgGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAg                                                                                               >  8:169848‑M1/98‑149 (MQ=255)
                                                  ggCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCTACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGc                                                                                              <  8:232252/149‑1 (MQ=255)
                                                     cTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGa                                                                                           >  2:130385/1‑149 (MQ=255)
                                                        ccAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGt                                                                                        >  4:127695/1‑149 (MQ=255)
                                                           aggcaaggGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCg                                                                                     <  8:105237/149‑1 (MQ=255)
                                                            ggcaaggGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATgg                                                                                                       >  8:38654/1‑130 (MQ=255)
                                                            ggcaaggGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATgg                                                                                                       <  7:38654/130‑1 (MQ=255)
                                                                     gttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGc                                                                                              <  4:78546‑M1/53‑1 (MQ=255)
                                                                     gttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGc                                                                                              >  3:78546‑M1/78‑130 (MQ=255)
                                                                      aCTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTc                                                                          <  2:82157/149‑1 (MQ=255)
                                                                          gCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTcaac                                                                       >  5:103304/1‑148 (MQ=255)
                                                                             ggTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATg                                                                   <  7:113337/149‑1 (MQ=255)
                                                                                 ctgcAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCt                                                               <  3:127695/149‑1 (MQ=255)
                                                                                  tgcAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCt                                                               >  2:127377/1‑148 (MQ=255)
                                                                                   gcAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTg                                                              >  4:187592/1‑148 (MQ=255)
                                                                                    cAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCt                                                               <  1:127377/146‑1 (MQ=255)
                                                                                     aaCAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTa                                                            >  3:210935/1‑148 (MQ=255)
                                                                                     aaCAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTAc                                                           <  2:202825/149‑1 (MQ=255)
                                                                                      aCAGATGGGCAAGGTCTCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACa                                                          <  6:103304/149‑1 (MQ=255)
                                                                                        aGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAg                                                         >  5:102647/1‑148 (MQ=255)
                                                                                           tGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAag                                                     <  6:40674/149‑1 (MQ=255)
                                                                                            gggCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGACAACAATGGCCTGTACATCAag                                                     >  6:213078/1‑148 (MQ=255)
                                                                                             ggCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAagga                                                   <  1:130385/149‑1 (MQ=255)
                                                                                             ggCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGc                                                                 >  4:216376/1‑134 (MQ=255)
                                                                                               cAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAaggagg                                                 <  3:43162/149‑1 (MQ=255)
                                                                                                      gCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTGCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGc                                           >  2:133023/1‑148 (MQ=255)
                                                                                                        tgaacggCTGGATGAACTCATCGAGCCGAACACTAAAGGCCAGCTCTTTGACCAAAGCTGCACTTAAACCCGCAAAGCGATCATGCTCAAACAGCCGATCTTCGATGACATAGACAACAATGGCCTGTACAGCAAGGAGGGCCCGCAAg                                        >  6:28187/7‑149 (MQ=255)
                                                                                                           tgtgCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGt                                     <  6:55870/149‑1 (MQ=255)
                                                                                                                  gATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAAGCAGGCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAg                              <  5:213078/149‑1 (MQ=255)
                                                                                                                  gATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAg                              >  4:74342/1‑149 (MQ=255)
                                                                                                                       gTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGCCCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAgg                         >  3:26651/1‑149 (MQ=255)
                                                                                                                           aTCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCa                                                       <  7:276426/115‑1 (MQ=255)
                                                                                                                           aTCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCa                                                       >  8:276426/1‑115 (MQ=255)
                                                                                                                               aGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAAc                 >  5:174630/1‑149 (MQ=255)
                                                                                                                                gCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAAcc                <  1:261936/149‑1 (MQ=255)
                                                                                                                                    ttCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCAt            >  8:221803/1‑149 (MQ=255)
                                                                                                                                    ttCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTGCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCAt            <  1:133023/149‑1 (MQ=255)
                                                                                                                                      cAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCaa                           <  5:189598/132‑1 (MQ=255)
                                                                                                                                      cAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCaa                           >  6:189598/1‑132 (MQ=255)
                                                                                                                                        agagCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGACGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGGAAGCGTTCGTGAGCAAGTCCGACAACTGCATCGCt        <  5:28187/149‑1 (MQ=255)
                                                                                                                                              gCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCATCGCTTTCGcc  <  3:74342/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
CCCAAGGGTCAGAAACCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCATCGCTTTCGCC  >  NC_002947/1855286‑1855576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.