New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1855432 = | 50 (1.020) | 3 (0.070) | 3/238 | NT | 6.8% | coding (444/1341 nt) | PP_1659 | hypothetical protein |
? | NC_002947 | 1855485 = | 37 (0.830) | coding (497/1341 nt) | PP_1659 | hypothetical protein |
CCCAAGGGTCAGAAACCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCATCGCTTTCGCC > NC_002947/1855286‑1855576 | ccaggccgacttgaccatgatcgcgccgacctgctgggtcttttgcgaaccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCt < 3:174079‑M1/3‑1 (MQ=255) ccAAGGGTCAGAAACCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTg > 5:55870/1‑149 (MQ=255) aggccgacttgaccatgatcgcgccgacctgctgggtcttttgcggaccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTgg > 3:300520‑M1/145‑149 (MQ=255) aggccgacttgaccatgatcgcgccgacctgctgggtcttttgcgaaccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTgg > 4:174079‑M1/145‑149 (MQ=255) ggccgacttgaccatgatcgcgccgacctgctgggtcttttgcgaaccgcaggtgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTGGt > 3:208732‑M1/144‑149 (MQ=255) aaGGGTCAGAACCCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGAACGGCCCGCTGGt > 7:232252/1‑149 (MQ=255) gccgacttgaccatgatcgcgccgacctgctgggtcttttgcgaaccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTg < 4:47838‑M1/4‑1 (MQ=255) gccgacttgaccatgatcgcgccgacctgctgggtcttttgcgaaccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTg > 3:47838‑M1/143‑146 (MQ=255) gccgacttgaccatgatcgcgccgacctgctgggtcttttgcgaaccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTGGtt < 4:210935‑M1/7‑1 (MQ=255) ggcAGAAACCCGTCGCCTGGGACCAGCCGGCGCCCGTGCCCGCGGCCTGCCAAGGCACGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGGTCAAGACCGGCCCGCTGGTTGAc < 3:174387/147‑1 (MQ=255) gTCAGAAACCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGAc > 8:113337/1‑149 (MQ=255) ttgaccatgatcgcgccgacctgctgggtcttttgcgaaccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctatacaggccattgttgacgatgtcatcgaacatcgGCTGGTTGACCa < 7:169848‑M1/12‑1 (MQ=255) tCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACt < 6:232301/149‑1 (MQ=255) ccTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTac < 6:222082/149‑1 (MQ=255) ccTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTa > 5:142692/1‑148 (MQ=255) cTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTaca > 4:43162/1‑149 (MQ=255) aCCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACAcgcg > 7:105237/1‑148 (MQ=255) cccGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCAt > 2:261936/1‑149 (MQ=255) ccGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACgcgc < 1:284684/131‑1 (MQ=255) ccGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACgcgc > 2:284684/1‑131 (MQ=255) ccGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAAc < 6:142692/149‑1 (MQ=255) ccGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAAc > 5:40674/1‑149 (MQ=255) ccgcaggcgaaagcgatgcggttgtcggccttgctcaggaacgcttgctggccctccttgctatacaggccattgttgacgatgtcatcgaacatcgGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAg > 8:169848‑M1/98‑149 (MQ=255) ggCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCTACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGc < 8:232252/149‑1 (MQ=255) cTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGa > 2:130385/1‑149 (MQ=255) ccAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGt > 4:127695/1‑149 (MQ=255) aggcaaggGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCg < 8:105237/149‑1 (MQ=255) ggcaaggGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATgg > 8:38654/1‑130 (MQ=255) ggcaaggGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATgg < 7:38654/130‑1 (MQ=255) gttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGc < 4:78546‑M1/53‑1 (MQ=255) gttgtcggccttgctcaggaacgcttgctggccctccttgctgtacaggccattgttgacgatgtcatcgaacatcgGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGc > 3:78546‑M1/78‑130 (MQ=255) aCTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTc < 2:82157/149‑1 (MQ=255) gCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTcaac > 5:103304/1‑148 (MQ=255) ggTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATg < 7:113337/149‑1 (MQ=255) ctgcAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCt < 3:127695/149‑1 (MQ=255) tgcAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCt > 2:127377/1‑148 (MQ=255) gcAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTg > 4:187592/1‑148 (MQ=255) cAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCt < 1:127377/146‑1 (MQ=255) aaCAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTa > 3:210935/1‑148 (MQ=255) aaCAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTAc < 2:202825/149‑1 (MQ=255) aCAGATGGGCAAGGTCTCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACa < 6:103304/149‑1 (MQ=255) aGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAg > 5:102647/1‑148 (MQ=255) tGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAag < 6:40674/149‑1 (MQ=255) gggCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGACAACAATGGCCTGTACATCAag > 6:213078/1‑148 (MQ=255) ggCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAagga < 1:130385/149‑1 (MQ=255) ggCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAG‑CGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGc > 4:216376/1‑134 (MQ=255) cAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAaggagg < 3:43162/149‑1 (MQ=255) gCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTGCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGc > 2:133023/1‑148 (MQ=255) tgaacggCTGGATGAACTCATCGAGCCGAACACTAAAGGCCAGCTCTTTGACCAAAGCTGCACTTAAACCCGCAAAGCGATCATGCTCAAACAGCCGATCTTCGATGACATAGACAACAATGGCCTGTACAGCAAGGAGGGCCCGCAAg > 6:28187/7‑149 (MQ=255) tgtgCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGt < 6:55870/149‑1 (MQ=255) gATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAAGCAGGCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAg < 5:213078/149‑1 (MQ=255) gATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAg > 4:74342/1‑149 (MQ=255) gTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGCCCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAgg > 3:26651/1‑149 (MQ=255) aTCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCa < 7:276426/115‑1 (MQ=255) aTCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCa > 8:276426/1‑115 (MQ=255) aGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAAc > 5:174630/1‑149 (MQ=255) gCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAAcc < 1:261936/149‑1 (MQ=255) ttCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCAt > 8:221803/1‑149 (MQ=255) ttCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTGCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCAt < 1:133023/149‑1 (MQ=255) cAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCaa < 5:189598/132‑1 (MQ=255) cAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCaa > 6:189598/1‑132 (MQ=255) agagCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGACGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGGAAGCGTTCGTGAGCAAGTCCGACAACTGCATCGCt < 5:28187/149‑1 (MQ=255) gCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCATCGCTTTCGcc < 3:74342/149‑1 (MQ=255) | CCCAAGGGTCAGAAACCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACAACCGCATCGCTTTCGCC > NC_002947/1855286‑1855576 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |