New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2558125	40 (0.820)	5 (0.110)	5/250	NT	11.2%	coding (385/2235 nt)	fepA	ferric enterobactin transport system outer membrane subunit
	?	NC_002947	= 2558149	41 (0.880)					coding (409/2235 nt)	fepA	ferric enterobactin transport system outer membrane subunit

GGCCAATGACCTGTCCGACATCATCCGCCGCGAGCCCGGGGTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGTCGAGCGCATCGAAATCCTGCGTGGCCCGGCCGCCGCACGCTATGGCTCTGGCGCCATGGGCG  >  NC_002947/2557977‑2558272                                                                                                                                                     |                                                                                                                                                    ggCCAATGACCTGTCAGACATCATCCGCCGCGAGCCCGGGGTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCAT                                                                                                                                                     >  8:36934‑M1/1‑149 (MQ=255)    cAATGACCTGTCCGACATCATCCGCCGCGAGCCCGGGGTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATc                                                                                                                                                    >  3:225574/1‑147 (MQ=255)      aTGACCTGTCCGACATCATCCGCCGCGAGCCCGGGGTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAgc                                                                                                                                                >  6:244085/1‑149 (MQ=255)                     tcatcCGCCGCGAGCCCGGGGTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTa                                                                                                                                 <  5:244085/149‑1 (MQ=255)                     tcatcCGCCGCGAGCCCGGGGTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTa                                                                                                                                 <  2:79319/149‑1 (MQ=255)                       atcCGCCGCGAGCCCGGGGTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCAATCCAGCGCGCGCAACGCCGTAc                                                                                                                                <  7:36934/148‑1 (MQ=255)                        tcCGCCGCGAGCCCGGGGTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACATGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATagcgtacggcgttgcgcgcgctg                                                                                                                              >  6:283282‑M1/1‑126 (MQ=255)                         ccgccgCGAGCCCGGGGTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGc                                                                                                                              >  2:195268/1‑148 (MQ=255)                            ccgcGAGCCCGGGGTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTatg                                                                                                                          <  7:212851‑M2/149‑4 (MQ=255)                                 aGCCCGGGGTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTgg                                                                                                                     <  5:169545/149‑1 (MQ=255)                                  gCCCGGGGTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATagcgtacggcgttgcgcgcgctggatggcttgc                                                                                                                    <  5:283282‑M1/149‑34 (MQ=255)                                    ccGGGGTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATagcgtacggcgttgcgcgcgctggatggcttgccg                                                                                                                  <  7:25959‑M1/149‑36 (MQ=255)                                      ggggTTAACCTGACCGGCAACAGTGCCAGTGGGTCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACgg                                                                                                                >  1:197330/1‑149 (MQ=255)                                       gggTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGt                                                                                                               <  2:156330/149‑1 (MQ=255)                                       gggTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGt                                                                                                               <  2:197330/149‑1 (MQ=255)                                        ggTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTg                                                                                                              <  8:212851/149‑1 (MQ=255)                                          ttAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGCCATGCGCGGCCTGGGCCCGGAAACCACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGACGTACGCTATGGCTGGAACGGTGAc                                                                                                            >  5:214167/1‑149 (MQ=255)                                               cTGACCGGCAACAGTGCCAGTGTGGCACGCGGAAACCACCGTCAGAGCGACGTGCGCGGCAGTGTACCGGAAAACACCTTGATCCTAATCGACGTCAAGCCATCCAGCGCTCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGa                                                                                                       <  4:158280/149‑1 (MQ=255)                                               cTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCg                                                                                                          <  2:106277/146‑1 (MQ=255)                                               cTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCg                                                                                                          >  1:106277/1‑146 (MQ=255)                                                tGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATagcgtacggcgttgcgcgcgctggatggcttgccgt                                                                                                                 <  1:119764‑M1/138‑37 (MQ=255)                                                tGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATagcgtacggcgttgcgcgcgctggatggcttgccgt                                                                                                                 >  2:119764‑M1/1‑102 (MQ=255)                                                     ggCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCg                                                                                                          <  8:140703/140‑1 (MQ=255)                                                     ggCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCg                                                                                                          >  7:140703/1‑140 (MQ=255)                                                        aaCAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCgggg                                                                                              >  4:279707/1‑149 (MQ=255)                                                           aGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTg                                                                                            >  1:227979/1‑148 (MQ=255)                                                            gTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGa                                                                                           >  6:206344/1‑148 (MQ=255)                                                            gTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGCCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGa                                                                                           >  4:288838/1‑148 (MQ=255)                                                               ccAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCTCAACGCCGTACGCTATGGCTGGAACGGTGACCTTGATACTCGGGGTGAAAc                                                                                        <  1:195268/148‑1 (MQ=255)                                                               ccAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAAcc                                                                                       <  4:225574/149‑1 (MQ=255)                                                                       gCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGt                                                                               <  5:206344/149‑1 (MQ=255)                                                                           gcgGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTgccg                                                                           <  3:279707/149‑1 (MQ=255)                                                                             ggAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTgccggc                                                                         >  1:202287/1‑149 (MQ=255)                                                                              gAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTgccggcc                                                                        >  5:216519/1‑149 (MQ=255)                                                                                  caacCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAg                                                                    <  2:202287/149‑1 (MQ=255)                                                                                     cgcgCAGGTCGATCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCgg                                                                 >  3:301479/4‑149 (MQ=255)                                                                                      cGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGt                                                                >  8:93344/1‑149 (MQ=255)                                                                                        gCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGTc                                                               >  6:309005/1‑148 (MQ=255)                                                                                           gATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGTCGAgc                                                           <  5:265336/149‑1 (MQ=255)                                                                                                aCCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGTCGAGCGCATc                                                      <  5:309005/149‑1 (MQ=255)                                                                                                        ggCATGTGCCCTGAAAACACCTTGTTCCTCATCGACTGCAAGCCATCCAGCGCTCGCAACGCCGTACGCTATGGCTGGAACGGTGACGGTGATACTCGGGGTGAAACAAACTGGGTGCCGGCCGAAGCTGTCGAGCGCATCGAAATCCt                                              <  6:214167/149‑1 (MQ=255)                                                                                                        ggCATGGGCCCGGAAAACACCTTGATCCTCATCGACGCCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGTCGAGCGCATCGAAATCCt                                              <  3:288838/149‑1 (MQ=255)                                                                                                                    gAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGTCGAGCGCAGCGAAATCCTGCGTGGCCCGgc                                  >  8:194924/1‑149 (MQ=255)                                                                                                                       aaCACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGTCGAGCGCATCGAAATCCTGCGTGGCCCGgccgc                               >  4:187692/1‑149 (MQ=255)                                                                                                                              tGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGTCGAGCGCATCGAAATCCTGCGTGGCCCGGCCGCCGCACGc                        >  5:46124/1‑149 (MQ=255)                                                                                                                                  ccTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGTCGAGCGCATCGAAATCCTGCGTGGCCCGGCCGCCGCACGCTATg                    >  4:137505/1‑149 (MQ=255)                                                                                                                                    tCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGTCGAGCGCATCGAAATCCTGCGTGGCCCGGCCGCCGCACGCTATGGc                  >  5:15797/1‑149 (MQ=255)                                                                                                                                          aCGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTatggcttgccgtcgatgaggatcaaggtgttttccgggcccatgccgcgcaggtcgatctgccggttgtttccgcgtgccccactggcactgttgccggtca                       >  2:119764‑M2/1‑36 (MQ=255)                                                                                                                                          aCGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTatggcttgccgtcgatgaggatcaaggtgttttccgggcccatgccgcgcaggtcgatctgccggttgtttccgcgtgccccactggcactgttgccggtca                       <  1:119764‑M2/138‑103 (MQ=255)                                                                                                                                           cGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTatggcttgccgtcgatgaggatcaaggtgttttccgggcccatgccgcgcaggtcgatctgccggttgtttccgcgtgccccactggcactgttgccggtcaggttaaccccgg           <  7:25959‑M2/149‑115 (MQ=255)                                                                                                                                           cGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGTCGAGCGCATCGAAATCCTGCGTGGCCCGGCCGCCGCACGCTATGGCTCTGgcg           >  6:180391/1‑149 (MQ=255)                                                                                                                                            ggCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGTCGAGCGCATCGAAATCCTGCGTGGCCCGGCCGCCGCACGCTATGGCTCTGgcgc          <  4:301479/149‑1 (MQ=255)                                                                                                                                             gCAAGCCATCCAGCGCGCGCAACGCCGTACGCTatggcttgccgtcgatgaggatcaaggtgttttccgggcccatgccgcgcaggtcgatctgccggttgtttccgcgtgccccactggcactgttgccggtcaggttaaccccgggc         <  5:283282‑M2/149‑117 (MQ=255)                                                                                                                                                   cATagcgtacggcgttgcgcgcgctggatggcttgccgtcgatgaggatcaaggtgttttccgggcccatgccgcgcaggtcgatctgccggttgtttccgcgtgccccactggcactgttgccggtcaggttaaccccgggctcgcgg   <  7:212851‑M1/149‑147 (MQ=255)                                                                                                                                                    aTCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGTCGAGCGCATCGAAATCCTGCGTGGCCCGGCCGCCGCACGCTATGGCTCTGGCGCCATGGGCg  <  6:15797/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GGCCAATGACCTGTCCGACATCATCCGCCGCGAGCCCGGGGTTAACCTGACCGGCAACAGTGCCAGTGGGGCACGCGGAAACAACCGGCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACGCCGTACGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAACTGGGTGCCGGCCGAAGCGGTCGAGCGCATCGAAATCCTGCGTGGCCCGGCCGCCGCACGCTATGGCTCTGGCGCCATGGGCG  >  NC_002947/2557977‑2558272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.