New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4539726 = | 46 (0.940) | 8 (0.170) | 6/252 | NT | 15.2% | coding (559/831 nt) | nudC | NADH pyrophosphatase |
? | NC_002947 | 4539780 = | 45 (0.960) | coding (505/831 nt) | nudC | NADH pyrophosphatase |
TCCTCGATCTCGTCCGGTTGCATGACAATCTCGCCACCGGCGTACTCGGCATGGAAACCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAGCACGATCATGCTGGGTGAAATTCGCGGATAG > NC_002947/4539578‑4539874 | acgcaaattcgctgggagcgggcgatgtattgccaaccctgcgacctgcgcagctatccgcgaatttcacccagcatgatcgtgctggtgacccgcggcgatgaaatcctgctggcgcgttcgccgcgcttcgtcaccggggtgtacag < 3:102217‑M1/1‑1 (MQ=255) gATCTCGTCCGGTTGCATGACAATCTCGCCACCGGCGTACTCGGCATGGAAACCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCttcgcgcacttcgcgcac < 6:262758/147‑1 (MQ=255) gTCCGGTTGCATGACAATCTCGCCACCGGCGTACTCGGCATGGAAACCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCa < 1:5691/147‑1 (MQ=255) gtattgccaaccctgcgacctgcgcagctatccgcgaatttcacccagcatgatcgtgctggtgacccgcggcgatgaaatcctgctggcgcgttcgccgcgcttcgtcaccggggtgtacaGCACCTTGGCA‑‑GTCTTCGGCCGATTCa < 8:144308‑M1/27‑1 (MQ=255) tctcGCCACCGGCGTACTCGGCATGGAAACCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCAccc > 7:222813/1‑149 (MQ=255) tgccaaccctgcgacctgcgcagctatccgcgaatttcacccagcatgatcgtgctggtgacccgcggcgatgaaatcctgctggcgcgttcgccgcgcttcgtcaccggggtgtacaGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCgg < 5:8404‑M1/31‑1 (MQ=255) cACCGGCGTACTCGGCATGGAAACCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCg < 1:36279/149‑1 (MQ=255) ccctgcgacctgcgcagctatccgcgaatttcacccagcatgatcgtgctggtgacccgcggcgatgaaatcctgctggcgcgttcgccgcgcttcgtcaccggggtgtacaGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCgg < 3:83338‑M1/36‑1 (MQ=255) cGGCGTACTCGGCATGGAAACCGAGCATCATCGAATGCGGAAACGGCCAGCAATGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGc > 1:80516/1‑148 (MQ=255) tCGGCATGGAAACCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑gg < 6:237478/111‑1 (MQ=255) tCGGCATGGAAACCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑gg > 5:237478/1‑111 (MQ=255) ggCATGGAAACCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGcc > 6:120206/1‑148 (MQ=255) ggCATGGAAACCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGcc > 6:40541/1‑148 (MQ=255) ggCATGGAAACCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGcc > 2:215742/1‑148 (MQ=255) aTGGAAACCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAgg < 5:98068/149‑1 (MQ=255) tGGAAACCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGt > 5:167658/1‑149 (MQ=255) gctatccgcgaatttcacgcagcatgatcgtgctggtgacccgcggcgatgaaatcctgctggcgcgttcgccgcgcttcgtcaccggggtgtacaGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTg > 3:230305‑M1/97‑149 (MQ=255) gctatccgcgaatttcacccagcatgatcgtgctggtgacccgcggcgatgaaatcctgctggcgcgttcgccgcgcttcgtcaccggggtgtacaGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTg > 4:83338‑M1/97‑149 (MQ=255) aaCCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCt < 8:222813/148‑1 (MQ=255) aaCCCAGAATCATAGAATGCGGAAACGGCCAGAACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCt < 8:211715/148‑1 (MQ=255) tccgcgaatttcacccagcatgatcgtgctggtgacccgcggcgatgaaatcctgctggcgcgttcgccgcgcttcgtcaccggggtgtacaGCACCTTGGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCt > 7:144308‑M1/93‑148 (MQ=255) tccgcgaatttcacccagcatgatcgtgctggtgacccgcggcgatgaaatcctgctggcgcgttcgccgcgcttcgtcaccggggtgtacaGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTg > 3:146906‑M1/93‑148 (MQ=255) tccgcgaatttcacccagcatgatcgtgctggtgacccgcggcgatgaaatcctgctggcgcgttcgccgcgcttcgtcaccggggtgtacaGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTg > 6:8404‑M1/93‑148 (MQ=255) aCCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGt < 2:80516/149‑1 (MQ=255) catcatCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACAccc < 5:120206/149‑1 (MQ=255) tcatcGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCa < 2:116260/110‑1 (MQ=255) tcatcGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCa > 1:116260/1‑110 (MQ=255) tcatcGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCg < 4:23682/149‑1 (MQ=255) catcGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTACACCGCCACTTATTCGCGCACTTCCAGGTCCA‑GGCAAGGGATACGCCCAATTCACCCGGTACGGAAAAACCTGCCAAGGTGATGTAAAcccc > 1:99456/1‑149 (MQ=255) atcGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGt < 1:293683/149‑1 (MQ=255) cGAATGCGGAAACGACCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGa > 4:277258/1‑149 (MQ=255) gAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAgcgc > 2:118381/1‑149 (MQ=255) cGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACACGGTTAGGCAAAACCTGCCAAGGTGCTGTACACACCGGTGACGAAGCgcggc > 6:80830/1‑148 (MQ=255) gACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGAttt > 7:58884/1‑149 (MQ=255) cGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCa < 1:215742/149‑1 (MQ=255) tACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGAACTTCGCTCACCA‑GGCA‑‑GTCTTAGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGAAGAAGCGCGGCGAACGCGCCAGCAGGATTTCATc < 5:80830/149‑1 (MQ=255) aaTGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCgg > 1:109977/1‑107 (MQ=255) aaTGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCgg < 2:109977/107‑1 (MQ=255) tGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCgg < 1:118381/149‑1 (MQ=255) ttcttcACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCggg < 5:40541/148‑1 (MQ=255) ttcttcACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGt > 7:14019/1‑149 (MQ=255) cACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCAc > 5:304075/1‑147 (MQ=255) ccTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAg > 5:115485/1‑148 (MQ=255) ccTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAg > 4:289039/1‑148 (MQ=255) cTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAGCa > 4:53616/1‑149 (MQ=255) ccACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGcc > 2:55814/1‑116 (MQ=255) ccACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGcc < 1:55814/116‑1 (MQ=255) cACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAGCAc < 2:99456/147‑1 (MQ=255) ccGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAGCACGAt > 8:173193/1‑148 (MQ=255) ccACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAGCACGATCATg > 4:266365/1‑149 (MQ=255) cttcgcgcacttcgcgcaCCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAGCACGATCATGCTGGGt > 3:146444/1‑149 (MQ=255) ttcgcgcacttcgcgcacCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAGCACGATCATGCTggggg > 1:109475/1‑147 (MQ=255) cgcgcacttcgcgcacCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAGCATGATCGTGCTggtga < 6:304075/147‑4 (MQ=255) cttcgcgcacCA‑GGCA‑‑GTCTTCGTCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAGCACGATCATGCTGGGTGAAATTcgc < 3:266365/149‑1 (MQ=255) cttcgcgcacCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAGCACGATCATGCTGGGTGAAATTcgc < 8:14019/149‑1 (MQ=255) cttcgcgcacCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAGCACGATCATGCTGGGTGAAATTcgc < 2:109475/149‑1 (MQ=255) cgcgcacCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAGCACGATCATGCTGGGTGAAATTcgcg < 8:58884/147‑1 (MQ=255) GCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAGCACGATCATGCTGGGTGAAATTCGCGGATAg < 8:23723‑M1/149‑1 (MQ=255) | TCCTCGATCTCGTCCGGTTGCATGACAATCTCGCCACCGGCGTACTCGGCATGGAAACCGAGCATCATCGAATGCGGAAACGGCCAGCACTGGCTGCCGACGTACTGAATGTTCTTCACCTCCACCGCCACTTCTTCGCGCACTTCGCGCACCA‑GGCA‑‑GTCTTCGGCCGATTCACCCGGTTCGGCAAAACCTGCCAAGGTGCTGTACACCCCGGTGACGAAGCGCGGCGAACGCGCCAGCAGGATTTCATCGCCGCGGGTCACCAGCACGATCATGCTGGGTGAAATTCGCGGATAG > NC_002947/4539578‑4539874 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |