New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5534108 =	63 (1.290)	3 (0.060)	3/252	NT	5.2%	coding (367/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein
	?	NC_002947	5534150 =	48 (1.020)					coding (325/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein

TGCAACACCGCAACCTTCTTGCCCTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCACGGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCC  >  NC_002947/5533960‑5534252                                                                                                                                                      |                                                                                                                                                 tGCAACACCGCAACCTTCTTGCCCTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGc                                                                                                                                                  >  2:261045/1‑149 (MQ=255)  gCAACACCGCAACCTTCTTGCCCTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGc                                                                                                                                                  >  2:295805/1‑148 (MQ=255)  aacgccgctggtggcgtgaatggcgagaaaatcgtcctggtcaaaggcgatgacgcctgtgaaccgaagcaagccgtggccgtggccaaccgcctggtcgatcaggacaaggtgattggcgtggtgggccacttctgttcctccaacac                                                                                                                                                  <  1:128574‑M1/1‑1 (MQ=255)    aaCACCGCAACCTTCTTGCCCTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGAt                                                                                                                                               >  4:238656/1‑149 (MQ=255)      cacCGCAACCTTCTTGCCCTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCa                                                                                                                                             <  8:151603/149‑1 (MQ=255)      cacCGCAACCTTCTTGCCCTTGAGCACGTCGACGATGTAGTAGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATCAGGAACATGGCACTCAGGCCGCGCTCAGTCACCTCAGGGTAGG‑TGGAGCCTGGGGTGATGGCGagaa                                                                                                                                             >  3:285578/1‑146 (MQ=255)        ccGCAACCTTCTTGCCCTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCCCGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCAcg                                                                                                                                           >  6:69089/1‑149 (MQ=255)        ccGCAACCTTCTTGCCCTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCAcg                                                                                                                                           >  8:279671/1‑149 (MQ=255)          gCAACCTTCTTGCCCTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCAcgcc                                                                                                                                         >  4:197059/1‑149 (MQ=255)           cAACCTTCTTGCCCTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCAcgccc                                                                                                                                        >  7:105718/1‑149 (MQ=255)                     gCCCTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTc                                                                                                                                <  4:219499/147‑1 (MQ=255)                     gCCCTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTc                                                                                                                                <  2:183848/147‑1 (MQ=255)                      cccTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCata                                                                                                                             <  5:52291/149‑1 (MQ=255)                      cccTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCata                                                                                                                             >  8:241973/1‑149 (MQ=255)                        cTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCAtata                                                                                                                           <  7:167779/149‑1 (MQ=255)                               aCGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGa                                                                                                                    >  1:126970/1‑149 (MQ=255)                                 gTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGGCTGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGAc                                                                                                                   <  1:75559/149‑1 (MQ=255)                                     aggaTGTAGTCGCCAGCGACGATAGCCTGCTGGTCGTCACGGCCGCAAATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCg                                                                                                               <  4:285578/146‑1 (MQ=255)                                          tcaaaggcgatgacgcctgtgaaccgaagcaagccgtggccgtggccaaccgcctggtcgatcaggacaaggtgattggcgtggtgggccacttctgttcctccaacaCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATc                                                                                                          <  4:240170‑M1/41‑1 (MQ=255)                                           tAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCgt                                                                                                        <  5:166783/149‑1 (MQ=255)                                           tAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCgt                                                                                                        >  6:166783/1‑149 (MQ=255)                                             gTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGCTCgtg                                                                                                       <  7:279671/148‑1 (MQ=255)                                              aggcgatgacgcctgtgaaccgaagcaagccgtggccgtggccaaccgcctggtcgatcaggacaaggtgattggcgtggtgggccacttctgttcctccaacaCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCgtgt                                                                                                      >  3:240170‑M1/105‑149 (MQ=255)                                                 cgatgacgcctgtgaaccgaagcaagccgtggccgtggccaaccgcctggtcgatcaggacaaggtgattggcgtggtgggccacttctgttcctccaacaCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTgg                                                                                                   >  4:74126‑M1/102‑149 (MQ=255)                                                 ccAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTgga                                                                                                  <  5:205581/149‑1 (MQ=255)                                                  cAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTggag                                                                                                 <  7:241973/149‑1 (MQ=255)                                                   aGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCTGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTggagg                                                                                                <  1:295805/149‑1 (MQ=255)                                                     cgacgaTACCCTGCTGGTCGTCACGGTCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGaa                                                                                              <  2:269825/149‑1 (MQ=255)                                                      gacgaTACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGaa                                                                                              >  4:30261/1‑148 (MQ=255)                                                      gacgaTACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAAc                                                                                             <  8:105718/149‑1 (MQ=255)                                                             cccTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGCTCGTGTTGGAGGAACCGCAGTg                                                                                      >  3:233248/1‑149 (MQ=255)                                                             cccTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGt                                                                                       <  3:197059/148‑1 (MQ=255)                                                              ccTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCTCTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTAGGACGCCGGGATCGTGTTCGAGGAACAGAAGTgg                                                                                     >  2:238394/1‑149 (MQ=255)                                                              ccTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTgga                                                                                                  >  2:184554/1‑136 (MQ=255)                                                              ccTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTgg                                                                                     >  2:73120/1‑149 (MQ=255)                                                              ccTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTAATATACCTCGGACGCCGGGATCGTGTTgga                                                                                                  <  1:184554/136‑1 (MQ=255)                                                               ctgctgGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACg                                                                                                                  >  3:13978/1‑119 (MQ=255)                                                               ctgctgGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACg                                                                                                                  <  4:13978/119‑1 (MQ=255)                                                               ctgctgGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGc                                                                                    >  8:178488/1‑149 (MQ=255)                                                                     gtcgtcACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCccacca                                                                              >  8:291061/1‑149 (MQ=255)                                                                        gtcACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAg                                                                                           <  8:237074/133‑1 (MQ=255)                                                                        gtcACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAg                                                                                           >  7:237074/1‑133 (MQ=255)                                                                           aCGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCa                                                                         >  6:227424/1‑148 (MQ=255)                                                                             ggCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAAt                                                                       >  6:149417/1‑148 (MQ=255)                                                                              gCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCg                                                                                                               >  8:259823/1‑107 (MQ=255)                                                                              gCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCg                                                                                                               <  7:259823/107‑1 (MQ=255)                                                                              gCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCa                                                                     >  6:27089/1‑149 (MQ=255)                                                                                cGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCAcc                                                                   <  1:261045/149‑1 (MQ=255)                                                                                  cacaTGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCtt                                                                 <  5:27089/149‑1 (MQ=255)                                                                                   acaTGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCACGTCATATACCTCGGACGCCgg                                                                                                              >  5:59410/1‑103 (MQ=255)                                                                                   acaTGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCACGTCATATACCTCGGACGCCgg                                                                                                              <  6:59410/103‑1 (MQ=255)                                                                                          gAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGAt                                                         <  5:69089/149‑1 (MQ=255)                                                                                          gAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGAt                                                         <  7:291061/149‑1 (MQ=255)                                                                                          gAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGAt                                                         <  1:254690/149‑1 (MQ=255)                                                                                             cATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGa                                                      <  3:238656/149‑1 (MQ=255)                                                                                              aTGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGtt                                                                                                     <  8:70417/101‑1 (MQ=255)                                                                                              aTGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGtt                                                                                                     >  7:70417/1‑101 (MQ=255)                                                                                              aTGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGAc                                                     >  7:14185/1‑149 (MQ=255)                                                                                               ggcctcTCAGCGCGCGCTCCGGGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGAcc                                                    <  4:233248/144‑1 (MQ=255)                                                                                                ggCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGAc                                                     >  7:148328/1‑147 (MQ=255)                                                                                                 gCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCa                                                   <  7:178488/148‑1 (MQ=255)                                                                                                  cACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAgg                                                 <  4:78340/149‑1 (MQ=255)                                                                                                  cACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCGGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAgg                                                 >  3:154845/1‑149 (MQ=255)                                                                                                   aCTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCGGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGc                                                <  4:154845/149‑1 (MQ=255)                                                                                                                              gTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCACGGCCACGgctt                           >  2:226459/1‑143 (MQ=255)                                                                                                                              gTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCACGGCCACGgctt                           <  1:226459/143‑1 (MQ=255)                                                                                                                                      gAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGATGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCACGGCCACGGCTTGCTTCGGTTcac               <  3:251232/148‑1 (MQ=255)                                                                                                                                       aGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCACGGCCACGGCTTGCTTCGGTTCACAg             <  2:126970/149‑1 (MQ=255)                                                                                                                                         ccTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCACGGCCACGGCTTGCTTCGGTTCACAGGc           >  5:216323/1‑149 (MQ=255)                                                                                                                                              ggTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCACGGCCACGGCTTGCTTCGGTTCACAGGCGTCAt      <  5:227424/149‑1 (MQ=255)                                                                                                                                               gTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCACGGCCACGGCTTGCTTCGGTTCACAGGCGTCATc     <  5:149417/149‑1 (MQ=255)                                                                                                                                                 gATGGCGATCACGCCCGCCACGACATAAACCTCGGACGCCGGGAACGTGATGGAGGAACAGAAGTGGCCCAACAAGCCAATCACCTAGACCTTATCGACCAGCCGGTAGCCCACGGCCACGGCTTGCTTCGGTTCACAGACGTCaaagc   >  2:70222/1‑145 (MQ=255)                                                                                                                                                  aTGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCACGGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGcc  >  2:128574/1‑149 (MQ=255)                                                                                                                                                  aTGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGCCCACGGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGcc  >  1:256136/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                 TGCAACACCGCAACCTTCTTGCCCTTGAGCACGTCGACGATGTAGTCGCCAGCGACGATACCCTGCTGGTCGTCACGGCCGCACATGCGGAACATGGCACTCAGGCCGCGCTCAGTGACCTGTGGGTTGG‑TGGAGCCTGGGGTGATGGCGATCACGCCCGCCTCGTCATATACCTCGGACGCCGGGATCGTGTTGGAGGAACAGAAGTGGCCCACCACGCCAATCACCTTGTCCTGATCGACCAGGCGGTTGGCCACGGCCACGGCTTGCTTCGGTTCACAGGCGTCATCGCC  >  NC_002947/5533960‑5534252

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.