New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 575473847 (0.960)4 (0.080) 4/254 NT 8.0% coding (934/1086 nt) glnL two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
?NC_002947 = 5754774 47 (0.990)coding (970/1086 nt) glnL two‑component system sensor histidine kinase/phosphatase GlnL/GlnG

CGCCTGGGTCGCATCACCTTGCGCAGCCGCGCCCTGCGCCAGTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGCCTTCTCGATTTACCTGCCTCTGGAACAAGGAGCCACCGCC  >  NC_002947/5754591‑5754884
                                                                                                                                                   |                                                                                                                                                   
cgcCTGGGTCGCATCACCTTGCGCAGCCGCGCCCTGCGCCAGTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGt                                                                                                                                                    <  7:27066/149‑1 (MQ=255)
  ccTGGGTCGCATCACCTTGCGCAGCCGCGCCCTGCGCCAGTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCa                                                                                                                                                  <  6:283292/149‑1 (MQ=255)
            aTCACCTTGCGCAGCCGCGCCCTGCGCCAGTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGccc                                                                                                                                        >  3:236684/1‑149 (MQ=255)
               aCCTTGCGCAGCCGCGCCCTGCGCCAGTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGa                                                                                                                                     <  4:37147/149‑1 (MQ=255)
                         gCCGCGCCCTGCGCCAGTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCggg                                                                                                                           >  6:90739/1‑149 (MQ=255)
                             cgcCCTGCGCCAGTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTgg                                                                                                                       <  1:135569/149‑1 (MQ=255)
                                 cTGCGCCAGTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCt                                                                                                                  <  5:167835/149‑1 (MQ=255)
                                  tGCGCCAGTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGccaggcccagcccggtaccgtccgggcggccact                                                                                                                   >  4:211556‑M1/1‑114 (MQ=255)
                                   gcgcCAGTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGccaggcccagcccggtaccgtccgggcggccactga                                                                                                                 >  3:111815‑M1/1‑113 (MQ=255)
                                     gcCAGTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGcc                                                                                                              >  2:61987‑M2/1‑147 (MQ=255)
                                      ccAGTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTACCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGcca                                                                                                             >  2:177648‑M2/1‑146 (MQ=255)
                                        aGTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGccaggcccagcccggtaccgtccgggcggccactgaccatg                                                                                                            <  4:111815‑M1/149‑42 (MQ=255)
                                         gTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGccaggcccagcccggtaccgtccgggcggccactgaccatgg                                                                                                           <  3:211556‑M1/149‑43 (MQ=255)
                                            cACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTAcc                                                                                                        <  5:90739/148‑1 (MQ=255)
                                             aCCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTAccc                                                                                                       <  7:288273/148‑1 (MQ=255)
                                                    gCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAAcatc                                                                                               <  5:161943/149‑1 (MQ=255)
                                                     ccACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAAcatca                                                                                              >  3:97491/1‑149 (MQ=255)
                                                      cACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTAcc                                                                                                        <  2:16352/138‑1 (MQ=255)
                                                      cACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTAcc                                                                                                        >  1:16352/1‑138 (MQ=255)
                                                           gggTCACCGGCTGGTAGCGCGGGTTGAGATCATCGACAACGGCCGAGGCATGCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAAcatca                                                                                              <  4:274857/141‑1 (MQ=255)
                                                           gCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAAcatca                                                                                              >  3:274857/1‑143 (MQ=255)
                                                            cGTCACCGCCTGGTAGCGAGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATcagcc                                                                                        <  5:98673/148‑1 (MQ=255)
                                                              tCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATcagccag                                                                                      >  8:3015/1‑148 (MQ=255)
                                                                   gCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAg                                                                                <  7:3015/149‑1 (MQ=255)
                                                                        gTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGcc                                                                            <  1:295618/148‑1 (MQ=255)
                                                                           gggctggTAGAGATCATCGACAAGGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGAt                                                                        <  3:161447/144‑1 (MQ=255)
                                                                           gcgcGGGTAGCGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCATGGGCCGCCCCGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGAt                                                                        <  7:184413/149‑1 (MQ=255)
                                                                           gcgcGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGAt                                                                        >  2:88078/1‑149 (MQ=255)
                                                                                ggTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAgt                                                                   <  1:277769/149‑1 (MQ=255)
                                                                                  tAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAgtgt                                                                 <  4:97491/149‑1 (MQ=255)
                                                                                     agaTCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGa                                                               >  7:256685/1‑148 (MQ=255)
                                                                                      gaTCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGaaa                                                             <  5:114817/149‑1 (MQ=255)
                                                                                       atcatcGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGAt                                                                        >  4:290415/1‑137 (MQ=255)
                                                                                       atcatcGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGAt                                                                        <  3:290415/137‑1 (MQ=255)
                                                                                       atcatcGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAg                                                            >  4:260017/1‑149 (MQ=255)
                                                                                          atcGACAACGGCCCAGGCATCCCGCCGGAACTTCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGcc                                                          <  6:277596/148‑1 (MQ=255)
                                                                                          atcGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCACTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGcc                                                          <  1:88078/149‑1 (MQ=255)
                                                                                             gACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGc                                                      >  1:301994/1‑149 (MQ=255)
                                                                                              aCAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCt                                                     <  3:136958/149‑1 (MQ=255)
                                                                                                aaCGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTgg                                                   >  3:180813/1‑149 (MQ=255)
                                                                                                aaCGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTgg                                                   >  6:80933/1‑149 (MQ=255)
                                                                                                       cAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATAcc                                            >  7:64940/1‑149 (MQ=255)
                                                                                                         ggCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGc                                          <  3:260017/149‑1 (MQ=255)
                                                                                                                cgccgGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGCCTtctc                                    >  7:5596/1‑148 (MQ=255)
                                                                                                                   cgGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGCCTTCTCGAtt                                <  2:301994/149‑1 (MQ=255)
                                                                                                                         tGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGCCTTCTCGATTTACCTg                          >  3:192387/1‑149 (MQ=255)
                                                                                                                         tGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGCCTTCTCGATTTACCTg                          >  6:265208/1‑149 (MQ=255)
                                                                                                                              gAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGCCTTCTCGATTTACCTGCctct                     >  6:203803/1‑149 (MQ=255)
                                                                                                                                         ctATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGCCTTCTCGATTTACCTGCCTCTGGAACAAg             <  4:236684/146‑1 (MQ=255)
                                                                                                                                         ctATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGCCTTCTCGATTTACCTGCCTCTGGAACAAGGa           <  8:256685/148‑1 (MQ=255)
                                                                                                                                         ctATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGCCTTCTCGATTTACCTGCCTCTGGAACAAGGa           <  8:64940/148‑1 (MQ=255)
                                                                                                                                         ctATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGCCTTCTCGATTTACCTGCCTCTGGAACAAGGAg          >  7:62867/1‑149 (MQ=255)
                                                                                                                                           aTCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGCCTTCTAGATTTAACTGCCTCTGGAACAAGGAGcc        >  8:259886/1‑149 (MQ=255)
                                                                                                                                            tCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGCCTTCTCGATTTACCTGCCTCTGGAACAAGGAGCCa       >  3:8467/1‑149 (MQ=255)
                                                                                                                                              ccATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGccatgggatagaagagggtttcctgcagttccggcgggatgcctgggccgttgtcgatgatctctacccgcgctaccaggcggtgacgcacgtggccgatggtgaac     <  3:211556‑M2/149‑108 (MQ=255)
                                                                                                                                              ccATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGCCTTCTCGATTTACCTGCCTCTGGAACAAGGAGCCAcc     >  7:155959/1‑149 (MQ=255)
                                                                                                                                               cATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGccatgggatagaagagggtttcctgcagttccggcgggatgcctgggccgttgtcgatgatctctacccgcgctaccaggcggtgacgcacgtggccgatggtgaact    <  4:111815‑M2/149‑109 (MQ=255)
                                                                                                                                                 tGGccaggcccagcccggtaccgtccgggcggccactgaccatggggtagaagagggtttcctgcagttccggcgggatgcctgggccgttgtcgatgatctctacccgcgctaccaggcggtgacgcacgtggccgatggtgaactgg   >  2:177648‑M1/1‑3 (MQ=255)
                                                                                                                                                  ggccaggcccagcccggtaccgtccgggcggccactgaccatgggatagaagagggtttcctgcagttccggcgggatgcctgggccgttgtcgatgatctctacccgcgctaccaggcggtgacgcacgtggccgatggtgaactggc  >  2:61987‑M1/1‑2 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CGCCTGGGTCGCATCACCTTGCGCAGCCGCGCCCTGCGCCAGTTCACCATCGGCCACGTGCGTCACCGCCTGGTAGCGCGGGTAGAGATCATCGACAACGGCCCAGGCATCCCGCCGGAACTGCAGGAAACCCTCTTCTATCCCATGGTCAGTGGCCGCCCGGACGGTACCGGGCTGGGCCTGGCCATTACCCAGAACATCATCAGCCAGCACCAGGGCCTGATCGAGTGTGAAAGCCACGCTGGCCATACCGCCTTCTCGATTTACCTGCCTCTGGAACAAGGAGCCACCGCC  >  NC_002947/5754591‑5754884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.