| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5914157 = | 34 (0.690) | 4 (0.100) | 4/206 | NT | 17.5% | intergenic (+49/+104) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| ? | NC_002947 | 5914253 = | 11 (0.290) | intergenic (+145/+8) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase | |||||
GTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATT > NC_002947/5914009‑5914290 | gTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTc < 8:203334/149‑1 (MQ=255) gttcgtgctgactacgcgcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggccg < 3:110950‑M1/2‑1 (MQ=255) cATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGcc < 5:196208/149‑1 (MQ=255) aTCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGccc > 3:147909/1‑149 (MQ=255) tCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCct < 5:219211/149‑1 (MQ=255) tCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCACCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCct > 1:255706/1‑149 (MQ=255) gctgactacgcgcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggccgccccca < 1:156051‑M1/8‑4 (MQ=255) cTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTcgcg > 8:273912/1‑149 (MQ=255) cgtcgCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTcgcg < 4:253522/146‑1 (MQ=255) cgtcgCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTcgcg < 1:31875/146‑1 (MQ=255) cgtcgCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCgg < 6:232535/147‑1 (MQ=255) cgtcgCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCgg < 7:273912/147‑1 (MQ=255) cgcgcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCgg > 5:210751‑M1/134‑147 (MQ=255) gcactgcgcactggttccgcgagcgcggctttgcgccgagtggcgtggagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACg < 7:63904‑M1/19‑1 (MQ=255) aaGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTc < 4:147909/149‑1 (MQ=255) aaGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCa < 5:9863/149‑1 (MQ=255) gAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAggg > 8:237879/1‑148 (MQ=255) aggtcggagaTCGAGTGCTCGAACTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTcgcg < 6:189405/118‑1 (MQ=255) aggtcggagaTCGAGTGCTCGAACTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTcgcg > 5:189405/7‑124 (MQ=255) aaGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTc > 3:54190/1‑148 (MQ=255) cGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCt < 4:54190/148‑1 (MQ=255) aGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAgg > 3:274248/1‑131 (MQ=255) aGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAgg < 4:274248/131‑1 (MQ=255) tCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTcg < 6:27730/104‑1 (MQ=255) tCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTcg > 5:27730/1‑104 (MQ=255) tCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCtg > 5:222742/1‑149 (MQ=255) tCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTAGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAAGGTGaacgcgg > 3:104152/1‑144 (MQ=255) cGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCtgt < 7:227944/149‑1 (MQ=255) gATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCtgt < 7:234146/148‑1 (MQ=255) gagcggctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCTGTGACTTACCt < 2:218121‑M1/66‑1 (MQ=255) gctgccggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCTGTGACTTACCTGTggg < 3:25683‑M1/71‑1 (MQ=255) gAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCTGTGACTTACCtgtg < 3:192163/147‑1 (MQ=255) aCAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCTGGGACTTACCTGTGGGcgcg > 8:160968/1‑149 (MQ=255) cggcggcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCgg > 4:25683‑M1/74‑149 (MQ=255) cAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCgg < 1:117919/149‑1 (MQ=255) aCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGc < 6:222742/149‑1 (MQ=255) gcgcgggcttcgctgtacaactaccagcgcaattcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTCAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGt > 1:218121‑M1/69‑149 (MQ=255) ccTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGccc < 1:20661/148‑1 (MQ=255) gCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCTGTGACGTACCTGTGGGAGCGGGCGTGCCcgcg > 7:74042/1‑148 (MQ=255) tACCGTGTAACCGAAACCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGCCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGCCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAaga < 7:160968/149‑1 (MQ=255) tgtAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCACTTCGCGGGCCCGCCCCCTCCCGCAGGGT‑AATTTAGAAGGCTGCAGCCTGTGGCATTCCTGTGGGAGCGGGCGGGGCCGCGAAGAGggcg > 1:3559/1‑149 (MQ=255) aaCGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTGGAAGGCTGAAGCCGGTGACTTACCTGTGGGCGCGGGCGTGCCCGCGAAGAGGGCGGccc > 7:223568/1‑149 (MQ=255) aaccgcggcCCCTCTCGGGGGGCTTTTTTTTTTGAGACCGGTGGCCCCCTCTTCGCGGGCCCGCCCGCCCCCGCTGGTT‑ATTTTCGACGGCTCACGCCTGGTACTTCCCGGGGGGCGGGGGCGGGCCCGCGAAGAGGGCGGCCCAgg < 8:223568/144‑1 (MQ=255) tcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGc < 3:190325‑M1/20‑1 (MQ=255) tcgaagattttcgagaagcccctgtaagcctgggcCGCCCTCTTCGCGGGCACGc > 4:190325‑M1/36‑55 (MQ=255) cggcgTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGACCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGaaaa > 7:67021/1‑149 (MQ=255) tttgAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGA‑AATTTCGAAGGCTGAACCCTGTGACTTACCTGTGGCAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAAtt < 7:237879/148‑1 (MQ=255) | GTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGT‑AATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATT > NC_002947/5914009‑5914290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |