New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 155882 | 55 (1.120) | 4 (0.090) | 4/248 | NT | 7.0% | coding (494/798 nt) | ygdQ | transport protein |
? | NC_002947 | = 155906 | 54 (1.170) | coding (470/798 nt) | ygdQ | transport protein |
GACCACGATCAGGAACGACAGCGCGAGCATCTTCAGCGACGGGTGCTTGTCGATGAAATTGCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTCCAGACCGTGGTAGATCTCTTGCGAGCTC > NC_002947/155758‑156049 | gACCACGATCAGGAACGACAGCGCGCGCATCTTCAGCGACGGGTGCTTGTCGATGAAATTACTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCAATCATCACCGGTACGAGGGAAACAATGCCCACAg > 4:201993/1‑149 (MQ=255) aCCACGATCAGGAACGACAGCGCGAGCATCTTCAGCGACGGGTGCTTGTCGATGAAATTGCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGc < 7:163584‑M2/149‑2 (MQ=255) cACGATCAGGAACGACAGCGCGAGCATCTTCAGCGACGGGTGCTTGTCGATGAAATTGCTGATGGCGCCGGCGCACAGCATCAGCACCAGCCCGGCCACAACGATGGCGGCGATCATCACCGGTCCGTGGGAAACCATGCCCACAGcgg > 2:79099‑M2/1‑146 (MQ=255) gATCAGGAACGACAGCGCGAGCATCTTCAGCGACGGGTGCTTGTCGATGAAATTGCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGcggtga < 6:147441‑M2/149‑7 (MQ=255) ggAACGACAGCGCGAGCATCTTCAGCGACGGGTGCTTGTCGATGAAATTGCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCAcc > 6:108091/1‑149 (MQ=255) gAGCATCTTCAGCGACGGGTGCTTGTCGATGAAATTGCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCgag > 3:256626/1‑148 (MQ=255) aTCTTCAGCGACGGGTGCTTGTCGATGAAATTGCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAacac < 8:163584/149‑1 (MQ=255) cggatctcGGGTGCTTGTCGATGAAATTGCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATg < 3:270644/142‑1 (MQ=255) cGACGGGTGCTTGTCGATGAAATTGCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCga < 1:273511/149‑1 (MQ=255) gACGGGTGCTTGTCGATGAAATTGCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCgat < 4:256626/149‑1 (MQ=255) gACGGGTGCTTGTCGATGAAATTGCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCAACACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCgat < 8:13683/149‑1 (MQ=255) gggTGGTTGTGGATGAAATTGCTGATGGCGCCGGCGCCCAGCCAAATAACCAGCCCGGCCACAACGCTGGCCGCGATCATCACCCGTACCTGGGAAACCCTGCCCACAGCGGGGATCACCCAGGGCAGCGAGAACACGaag > 4:270644/1‑139 (MQ=255) ggTGCTTGTCGATGAACTTGCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGatgatg < 7:227141/149‑1 (MQ=255) gATGAAATTGCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGga > 1:141021/1‑149 (MQ=255) tGCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGgtg > 6:133683/1‑149 (MQ=255) gCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGatgatg < 7:266794/145‑1 (MQ=255) gCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGatgatg > 8:266794/1‑145 (MQ=255) cTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGgtgt < 1:24290/148‑1 (MQ=255) tGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGgtg > 2:48443/1‑146 (MQ=255) tGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATAACCGGTAAGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGAAGATGGCGATCTGGATGATGgtg > 6:127384/1‑146 (MQ=255) aTGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCg < 8:61422/120‑1 (MQ=255) aTGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCg > 7:61422/1‑120 (MQ=255) aTGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTaga < 7:238165/148‑1 (MQ=255) gcgcCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTagaaga < 5:68221/148‑1 (MQ=255) gcgcCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAgaagaa < 3:87229/149‑1 (MQ=255) ccGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACtt < 3:184049/149‑1 (MQ=255) acaGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTg < 7:151971/143‑1 (MQ=255) acaGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTg > 8:151971/1‑143 (MQ=255) catcatCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTgcgc > 7:187907/1‑149 (MQ=255) tcatcaCCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCt > 4:123024/1‑114 (MQ=255) tcatcaCCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCt < 3:123024/114‑1 (MQ=255) catcaCCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCtt > 2:17710/1‑149 (MQ=255) atcaCCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCttt < 1:48443/149‑1 (MQ=255) tcaCCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTTGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTg < 5:147441/149‑1 (MQ=255) tcaCCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGcc > 5:230794/1‑136 (MQ=255) tcaCCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGcc < 6:230794/136‑1 (MQ=255) tcaCCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTgcgc < 1:182822/144‑1 (MQ=255) tcaCCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTgcgc > 2:182822/1‑144 (MQ=255) tcaCCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTg > 8:240126/1‑149 (MQ=255) ccACAACGATGGCGGCGATCATCACAGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACg > 5:247641/1‑149 (MQ=255) cacaACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGt > 5:244203/1‑149 (MQ=255) cacaACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGt > 4:140954/1‑149 (MQ=255) cggcgATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCg > 4:109939/1‑149 (MQ=255) ggcgATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGc > 5:165726/1‑149 (MQ=255) ggcgATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGc > 5:156293/1‑149 (MQ=255) tcatcaCCGGTACGTGGGAAACCATGCCCACAGcggtgatgatcgccgccatcgttgtggccgtgctggtgatgatgctgtgcgccggcgccatcagcaatttcatcgacaagcacccgtcgctgaagatgctcgcgctgtcgttcct < 6:195888‑M2/148‑116 (MQ=255) atcaCCGGTACGTGGGAAACCATGCCCACAGcggtgatgatcgccgccatcgttgtggccgtgctggtgatgatgctgtgcgccggcgccatcagcaatttcatcgacaagcacccgtcgctgaagatgctcgcgctgtcgttc > 4:17589‑M2/1‑31 (MQ=255) atcaCCGGTACGTGGGAAACCATGCCCACAGcggtgatgatcgccgccatcgttgtggccgtgctggtgatgatgctgtgcgccggcgccatcagcaatttcatcgacaagcacccgtcgctgaagatgctcgcgctgtcgttc < 3:17589‑M2/144‑114 (MQ=255) atcaCCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTc > 3:208836/1‑146 (MQ=255) atcaCCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTCCa < 8:187907/148‑1 (MQ=255) tcaCCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTCCAGa > 2:214841/1‑149 (MQ=255) ccGGTACGTGGGAAACCATGCCCACAGcggtgatgatcgccgccatcgttgtggccgtgctggtgatgatgctgtgcgccggcgccatcagcaatttcatcgacaagcacccgtcgctgaagatgctcgcgctgtcgttcctgatcgtg < 1:275323‑M2/149‑123 (MQ=255) cGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGTTGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTCCAGACCGTGGTAg < 3:201993/149‑1 (MQ=255) cGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTCCAGACCGTGGTa < 6:165726/148‑1 (MQ=255) cGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTCCAGACCGTGGTAg < 6:156293/149‑1 (MQ=255) gTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTCCAGACCGTgg > 5:99187/1‑145 (MQ=255) aaCCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCTTCTACGTTCTCGTCCTCGCCTTCCAGACCGTGGTAGATCTCtt < 1:214841/149‑1 (MQ=255) ccATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGTAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTCCAGACCGTGGTAGATCTCTTGc < 5:133683/149‑1 (MQ=255) cATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTCCAGACCGTGGTAGATCTCTTGc > 2:147999/1‑148 (MQ=255) cATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTCCAGACCGTGGTAGATCTCTTGc > 8:166419/1‑148 (MQ=255) cATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTCCAGACCGTGGTAGATCTCTTGCg < 1:17710/149‑1 (MQ=255) ccACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTCCAGACCGTGGTAGATCTCTTGCGAGctc < 7:240126/149‑1 (MQ=255) ccACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTCCAGACCGTGGTAGATCTCTTGCGAGctc > 5:108365/1‑149 (MQ=255) | GACCACGATCAGGAACGACAGCGCGAGCATCTTCAGCGACGGGTGCTTGTCGATGAAATTGCTGATGGCGCCGGCGCACAGCATCATCACCAGCACGGCCACAACGATGGCGGCGATCATCACCGGTACGTGGGAAACCATGCCCACAGCGGTGATCACCGAGTCCAGCGAGAACACGATGTCGATGATGGCGATCTGGATGATGGTGTAGAAGAACTTGCCACCTGCGCCTTTGGGCTCCTCTACGTTCTCGTCCTCGCCTTCCAGACCGTGGTAGATCTCTTGCGAGCTC > NC_002947/155758‑156049 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |