New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 156459	58 (1.190)	3 (0.060)	3/248	NT	5.6%	coding (1267/1308 nt)	citN	citrate transporter
	?	NC_002947	= 156485	46 (0.990)					coding (1241/1308 nt)	citN	citrate transporter

AGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACGGGCCATTTCCACCGGGGT  >  NC_002947/156338‑156630                                                                                                                                                    |                                                                                                                                                  aGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAg                                                                                                                                                  <  4:48170‑M2/149‑2 (MQ=255)  gCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCCGCAGTGCGCCGAGCATTATGCACAGGCATACCAg                                                                                                                                                  <  8:198341‑M2/148‑2 (MQ=255)   ccATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAgca                                                                                                                                                <  6:90559‑M2/149‑4 (MQ=255)        ccATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGcc                                                                                                                                           >  3:231779/1‑149 (MQ=255)          aTGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCa                                                                                                                                         >  6:17502/1‑149 (MQ=255)           tGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCAc                                                                                                                                        <  8:59418/149‑1 (MQ=255)           tGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCATCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCAc                                                                                                                                        >  8:58611/1‑149 (MQ=255)             tATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCTTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACtt                                                                                                                                      >  1:219026/1‑149 (MQ=255)                  tCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGc                                                                                                                                  <  4:114233/148‑1 (MQ=255)                   ccTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCg                                                                                                                                 <  4:231779/148‑1 (MQ=255)                    cTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGt                                                                                                                                <  7:139941/148‑1 (MQ=255)                       cGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGa                                                                                                                              <  8:159731/147‑1 (MQ=255)                         aGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAgcg                                                                                                                          <  7:17568/149‑1 (MQ=255)                            ggTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCtg                                                                                                                       <  5:17502/149‑1 (MQ=255)                             gTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCtga                                                                                                                      <  3:48170/149‑1 (MQ=255)                             gTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCtga                                                                                                                      >  5:111981/1‑149 (MQ=255)                                aTGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGAGTGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCtgatg                                                                                                                    <  7:202019/148‑1 (MQ=255)                                 tGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTgatgat                                                                                                                  <  6:111981/149‑1 (MQ=255)                                   gCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCg                                                                                                                <  7:156069/149‑1 (MQ=255)                                      aCGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAg                                                                                                                                   <  7:99859/127‑1 (MQ=255)                                      aCGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAg                                                                                                                                   >  8:99859/1‑127 (MQ=255)                                           ccccGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTc                                                                                                        <  6:221034/149‑1 (MQ=255)                                             ccGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGTATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAgcgc                                                                                                                         <  3:47858/130‑1 (MQ=255)                                             ccGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGTATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAgcgc                                                                                                                         >  4:47858/1‑130 (MQ=255)                                             ccGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGa                                                                                                      >  3:23504/1‑149 (MQ=255)                                                gTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATAc                                                                                                   <  5:199246/149‑1 (MQ=255)                                                             gcgtACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTAc                                                                                      <  5:52707/149‑1 (MQ=255)                                                               gtACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTAc                                                                                      >  6:123335/1‑147 (MQ=255)                                                                      aTACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCaggt                                                                              <  5:90559/148‑1 (MQ=255)                                                                          ggATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACt                                                                                                         >  1:186783/1‑117 (MQ=255)                                                                          ggATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACt                                                                                                         <  2:186783/117‑1 (MQ=255)                                                                             tGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAg                                                                      <  7:58611/149‑1 (MQ=255)                                                                               tATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAgg                                                                     <  1:61375/148‑1 (MQ=255)                                                                                 ttAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTa                                                                  >  4:153659/1‑149 (MQ=255)                                                                                   aaaGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTAc                                                                 >  3:64876/1‑148 (MQ=255)                                                                                         tactGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGTAGGGTACCAGCggg                                                          >  5:233079/1‑149 (MQ=255)                                                                                           ctGAACAGCGGGATAATCCCGATCAGCAGTGCGCCGAGCATTATGCCCAGGCATACCAGCACTGCCCACTTGAGCGTGACGCGCTGCTGATCGCCGAACTCGATACCGGCCAGGGCTTCCAGCAGGTGGGTGGAGGGTACCAGCGGGCt                                                        >  2:49860/1‑149 (MQ=255)                                                                                              aaCAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATc                                                                                                                 >  7:244578/1‑89 (MQ=255)                                                                                              aaCAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATc                                                                                                                 <  8:244578/89‑1 (MQ=255)                                                                                                   cGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGgt                                                <  7:198341/149‑1 (MQ=255)                                                                                                    gggAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGgtg                                               >  4:37134/1‑149 (MQ=255)                                                                                                      ggaaaTCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTa                                             >  1:146188/3‑149 (MQ=255)                                                                                                      gAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTa                                             >  3:256314/1‑149 (MQ=255)                                                                                                          aTCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCTGGCTGAGCAGGTGTACCgg                                         <  1:184968/149‑1 (MQ=255)                                                                                                             cccATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTg                                      >  6:275630/1‑149 (MQ=255)                                                                                                              ccATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAgcactgctgatggggattttcccgctgttcagtagtctttaatacatccgtatcacgtacgcgacgcgccctgaccggggcgcgttgccattaccgctcgaa                                             >  4:135391‑M2/1‑39 (MQ=255)                                                                                                              ccATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAgcactgctgatggggattttcccgctgttcagtagtctttaatacatccgtatcacgtacgcgacgcgccctgaccggggcgcgttgccattaccgctcgaa                                             <  3:135391‑M2/141‑103 (MQ=255)                                                                                                              ccATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGc                                     >  7:173235/1‑149 (MQ=255)                                                                                                                aTCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAgcactgctgatggggattttcccgctgttcagtagtctttaatacatccgtatcacgtacgcgacgcgccctgaccggggcgcgttgccattaccgctcgaaggaaaataca                                   <  1:110710‑M2/149‑113 (MQ=255)                                                                                                                aTCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGccc                                   <  4:64876/149‑1 (MQ=255)                                                                                                                     cagTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCcgacga                              >  8:119725/1‑149 (MQ=255)                                                                                                                          cgcCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCTGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGAc                         <  1:49860/149‑1 (MQ=255)                                                                                                                          cgcCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGa                          <  5:275630/148‑1 (MQ=255)                                                                                                                                gCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACgg                   <  5:123335/149‑1 (MQ=255)                                                                                                                                      tGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACGGGCCAt              <  2:219026/148‑1 (MQ=255)                                                                                                                                       gCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGAAACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACGGGCCAttt            >  1:88186/1‑149 (MQ=255)                                                                                                                                                 aCCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACGGGCCATTTCCACCGGGGt  >  5:130489/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                  AGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACGGGCCATTTCCACCGGGGT  >  NC_002947/156338‑156630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.