New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 293833 = | 60 (1.230) | 3 (0.060) | 3/254 | NT | 5.3% | coding (31/798 nt) | ssuC | aliphatic sulfonatesABC transporter permease |
? | NC_002947 | 293866 = | 49 (1.030) | coding (64/798 nt) | ssuC | aliphatic sulfonatesABC transporter permease |
CCGGAGGTTATGTAAGCCCGTTCGGCGAGATGGTGGCCAACGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTGGTGCGCAGCGGCGAAATCTGGACCCACCTGGCCATCAGCGGCTGGCG > NC_002947/293719‑294008 | ccGGAGGTTATGTAAGCCCGTTCGGCGAGATGGTGGCCAACGACCTCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTgctgct > 5:64804/1‑149 (MQ=255) cGGAGGTTATGTAAGCCCGTTCGGCGAGATGGTGGCCAACGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGctgctg > 6:11613/1‑149 (MQ=255) cgccgctgcgcaccagctcgacgccagcgcttaccactgcgctaggtgccggcaggatacgcgtcgacagccagccagcgctgacggccagttgccatattgccaacagCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTg > 6:167750‑M1/110‑148 (MQ=255) tATGTAAGCCCGTTCGGCGAGATGGTGGCCAACGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGTGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCaa > 6:290749/1‑149 (MQ=255) aTGTAAGCCCGTTCGGCGAGATGGTGGCCAACGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCaa > 6:142357/1‑148 (MQ=255) tGTAAGCCCGTTCGGCGAGATGGTGGCCAACGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAata < 4:154467/149‑1 (MQ=255) tAAGCCCGTTCGGCGAGATGGTGGCCAACGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAatat < 5:23145/148‑1 (MQ=255) aGCCCGTTCGGCGAGATGGTGGCCAACGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATgg < 5:39842/148‑1 (MQ=255) cccGTTCGGCGAGATGGTGGCCAACGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCa > 7:115982/1‑148 (MQ=255) gTTCGGCGAGATGGTGGCCAACGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGACGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTg > 4:261566/1‑149 (MQ=255) ttCGGCGAGATGGTGGCCAACGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTgg < 2:282677/149‑1 (MQ=255) ggCGTGATGGTGGCCAACGAGATGCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTGCAAGCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGcc < 7:97251/148‑1 (MQ=255) gCGAGATGGTGGCCAACGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGt > 8:89967/1‑149 (MQ=255) ggtggCCAACGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCgct > 3:15124/1‑149 (MQ=255) gCCAACGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCgctggc < 5:142357/148‑1 (MQ=255) aaCGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCcctggctggc > 5:204410/1‑149 (MQ=255) ccacctgccTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCgctggctggct < 1:263869/142‑1 (MQ=255) aCGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCgctggctggct < 4:60988/149‑1 (MQ=255) gACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGt > 3:9860/1‑149 (MQ=255) tCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGAc < 4:156569/149‑1 (MQ=255) cTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCgctggctggct > 2:263869/1‑141 (MQ=255) cccAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTa > 2:89775/1‑149 (MQ=255) aaaTCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAata > 4:22085/1‑106 (MQ=255) aaaTCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAata < 3:22085/106‑1 (MQ=255) tgtCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCGAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGcc < 3:101031/146‑1 (MQ=255) tgtCGCAGAGCTGAGGGCCTGGCCATGAGACGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGc < 3:261566/145‑1 (MQ=255) tCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCAc > 8:185859/1‑149 (MQ=255) gCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCAcc > 6:274699/1‑148 (MQ=255) gCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCAcc > 5:83098/1‑148 (MQ=255) cTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCa < 5:11613/149‑1 (MQ=255) gAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAg < 8:144598/148‑1 (MQ=255) gAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAg > 7:144598/1‑148 (MQ=255) aGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTg > 5:137821/1‑149 (MQ=255) ggCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGt < 1:89775/149‑1 (MQ=255) cTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAg > 2:202867/1‑149 (MQ=255) gCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAgcgc > 8:108408/1‑149 (MQ=255) ccATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCt < 7:89967/149‑1 (MQ=255) cATGAGTCGTGCAACTTCGTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATCTGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTg < 7:170575/149‑1 (MQ=255) gAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAg < 1:293605/134‑1 (MQ=255) gAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAg > 2:293605/1‑134 (MQ=255) tGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGc > 1:88883/1‑149 (MQ=255) tGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGc < 4:15124/149‑1 (MQ=255) aaCTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTgg < 6:137821/149‑1 (MQ=255) aCTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTGGt < 5:274699/149‑1 (MQ=255) cttcCAACCTGACGCAGAGCCTGGCGCCGTGGGCGGTGCCGGTGGTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTGGTgc < 6:204410/147‑1 (MQ=255) ccAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTAt < 7:160965/97‑1 (MQ=255) ccAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTAt > 8:160965/1‑97 (MQ=255) ccAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTGGTGCGCAgc > 5:251392/1‑149 (MQ=255) ccAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTGGTGCGCAg < 6:64804/148‑1 (MQ=255) caacagcagcaccggcagcgcccacggcgccaggcgctgCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTGGTGCGCAgcggcg > 6:167750‑M2/40‑148 (MQ=255) aCCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTGGTGCGCAGCGGCGaaa < 4:9860/148‑1 (MQ=255) aCCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTGGTGCGCAGCGGCGAAAt < 7:108408/149‑1 (MQ=255) cagcaccggcagcgcccacggcgccaggcgctgCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGc < 4:205310‑M2/87‑1 (MQ=255) cagcaccggcagcgcccacggcgccaggcgctgCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGc > 3:205310‑M2/34‑120 (MQ=255) ggCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTGGTGCGCAGCGGCGAAATCTGGACCCACCTGGCCATCa < 6:251392/149‑1 (MQ=255) ccGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTGGTGCGCAGCGGCGAAATCTGGACCCACCTGGCCATCAGCGGCTg > 6:119584/1‑149 (MQ=255) ggTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTGGTGCGCAGCGGCGAAATCTGGACCCACCTGGCCATCAGCGGCTGGc < 5:290749/149‑1 (MQ=255) ggTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTGGTGCGCAGCGGCGAAATCTGGACCCACCTGGCCATCAGCGGCTGGc < 8:115982/149‑1 (MQ=255) gTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTGGTGCGCAGCGGCGAAATCTGGACCCACCTGGCCATCAGCGGCTGGCg > 3:152724/1‑149 (MQ=255) | CCGGAGGTTATGTAAGCCCGTTCGGCGAGATGGTGGCCAACGACATCCTGCCCAAATCTGTGTCGCAGAGCTGAGGGCCTGGCCATGAGTCGTGCAACTTCTTCCAACCTGACCCAGCGCCTGGCGCCGTGGGCGCTGCCGGTGCTGCTGTTGGCAATATGGCAACTGGCCGTCAGCGCTGGCTGGCTGTCGACGCGTATCCTGCCGGCACCTAGCGCAGTGGTAAGCGCTGGCGTCGAGCTGGTGCGCAGCGGCGAAATCTGGACCCACCTGGCCATCAGCGGCTGGCG > NC_002947/293719‑294008 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |