New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1062897 =	49 (1.000)	4 (0.090)	4/250	NT	8.3%	coding (992/1050 nt)	xenB	xenobiotic reductase B
	?	NC_002947	1062966 =	42 (0.900)					coding (923/1050 nt)	xenB	xenobiotic reductase B

CCCGCGAATGGCCCTCAATCACAACCGCGGATAATCGATGTAACCCACCGGCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATGCTGTCGTCGGCCTCCCGCTCCCGCGAG  >  NC_002947/1062821‑1063109                                                                                                                                                  |                                                                                                                                                 cccGCGAATGGCCCTCAATCACAACCGCGGATAATCGATGTAACCCACCGGCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCa                                                                                                                                                >  7:211193/1‑148 (MQ=255)  ccGCGAATGGCCCTCAATCACAACCGCGGATAATCGATGTAACCCACCGGCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCaaa                                                                                                                                              <  4:32218/149‑1 (MQ=255)   gtcaacgagcggttcgacaaggccagtgccaatgcgggcctggccagtggcaaagcggatgccgtggcgtttggTGTGCCTCGTTCAACGTCGCATCCGCTGCGAGACGTGCCGGCAGGTCGGGTTTGGCGATGAACGGCACACGaaa                                                                                                                                              >  8:30212‑M1/75‑148 (MQ=255)            cccTCAATCACAACCGCGGATAATCGATGTAACCCACCGGCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCa                                                                                                                                    >  5:125225/1‑149 (MQ=255)                   tCACAACCGCGGATAATCGATGTAACCCACCGGCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGcct                                                                                                                             >  2:41594/1‑147 (MQ=255)                           gcgGATAATCGATGTAACCCACCGGCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCAACCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTg                                                                                                                     <  1:96240/149‑1 (MQ=255)                                   tCGATGTAACCCACCGGCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑c                                                                                                            >  3:67159/1‑149 (MQ=255)                                     gATGTAACCCACCGGCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCTGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGTG‑cc                                                                                                           >  7:16543/1‑148 (MQ=255)                                           aCCCACCGGCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATc                                                                                                                                  >  1:64828/1‑120 (MQ=255)                                           aCCCACCGGCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATc                                                                                                                                  <  2:64828/120‑1 (MQ=255)                                           aCCCACCGGCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTgg                                                                                                    >  7:267396/1‑149 (MQ=255)                                               aCCGGCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACt                                                                                                >  4:241198/1‑149 (MQ=255)                                                ccGGCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTg                                                                                               <  8:140286/149‑1 (MQ=255)                                                  ggCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGc                                                                                             <  6:207672/149‑1 (MQ=255)                                                  ggCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTCGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGc                                                                                             >  6:261080/1‑149 (MQ=255)                                                   gCCCCTTGCCATAGAAGGT‑‑‑‑GGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGt                                                                                        <  3:41142/149‑1 (MQ=255)                                                        ttGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTc                                                                                       >  5:150571/1‑149 (MQ=255)                                                           ccATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGaa                                                                                    <  3:252214/149‑1 (MQ=255)                                                                gAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCt                                                                               <  8:211193/149‑1 (MQ=255)                                                                 aaGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCa                                                                                                  <  1:150135/129‑1 (MQ=255)                                                                 aaGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCa                                                                                                  >  2:150135/1‑129 (MQ=255)                                                                 aaGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTc                                                                              <  3:241198/149‑1 (MQ=255)                                                                    gTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGtt                                                                           <  2:2618/149‑1 (MQ=255)                                                                       tCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGa                                                                         <  4:67159/148‑1 (MQ=255)                                                                        tttcgtgtgccgttcatcgccaaacccgacctgccggcacgtctcgcagcggatgcgacgttgaacgaggcacaCCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGC‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGAc                                                                        >  8:30212‑M2/75‑148 (MQ=255)                                                                             tgtgccgttcatcgccaaccccgacctgccggcacggctggcagcggatgcgccgttgaacgaggcacaCCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTa                                                                  >  7:389‑M2/70‑149 (MQ=255)                                                                                GCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACgg                                                               <  1:27075‑M1/149‑1 (MQ=255)                                                                                GCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACgg                                                               <  6:22904‑M1/149‑1 (MQ=255)                                                                                          actgcgaATCCGCTGCCAGCCGTGCCGGCAGGTCTGCGTAGGAGATGAACGTCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGCG‑ACGCATTGGAACTGGCCTTGTCGAACCGCTCTTTGACGATGTACGGGCCACAGa                                                       >  4:102944/4‑147 (MQ=255)                                                                                          aCGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAAt                                                     <  6:125225/149‑1 (MQ=255)                                                                                             gcgcATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGcc                                                  <  6:131007/149‑1 (MQ=255)                                                                                                cATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCctct                                               <  6:150571/149‑1 (MQ=255)                                                                                                cATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGATCGTTGACGATGTACGGGCCACCGAATGCctct                                               >  8:256856/1‑149 (MQ=255)                                                                                                   gacctgccggcacggctggcagcggatgcgccgttgaacgaggcacaCCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTg                                            <  8:389‑M2/102‑1 (MQ=255)                                                                                                     gCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGGCCCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTa                                                                  <  1:59068/126‑1 (MQ=255)                                                                                                     gCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTa                                                                  >  2:59068/1‑125 (MQ=255)                                                                                                         ccAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGc                                      >  5:49255/1‑149 (MQ=255)                                                                                                          cggcacggctggcagcggatgcgccgttgaacgaggaacaCCAAACGCCACGGCATCCGCTTTGCCACTGGGCAGGG‑CCGCATTGGCTCTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCg                                     <  7:30212‑M2/109‑1 (MQ=255)                                                                                                           aGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCgg                                    >  8:87973/1‑149 (MQ=255)                                                                                                                  ccGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATg                             <  5:22904/149‑1 (MQ=255)                                                                                                                  ccGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATg                             >  5:210821/1‑149 (MQ=255)                                                                                                                   cGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGc                                                                                                                          >  3:164073/1‑56 (MQ=255)                                                                                                                   cGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGc                                                                                                                          <  4:164073/56‑1 (MQ=255)                                                                                                                    ggCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATGCt                           <  8:267396/149‑1 (MQ=255)                                                                                                                     gCAGGTCGGGGTCGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATGCTg                          <  5:261080/149‑1 (MQ=255)                                                                                                                         gTCGTGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCg                                <  8:14942/139‑1 (MQ=255)                                                                                                                         gTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCg                                >  7:14942/1‑139 (MQ=255)                                                                                                                         gTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATGCTgtcgt                      <  6:210821/149‑1 (MQ=255)                                                                                                                               gTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATGCTGTCGTCGGCct                <  6:49255/149‑1 (MQ=255)                                                                                                                                     gATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATGCTGTCGTCGGCctccc             >  2:205555/1‑146 (MQ=255)                                                                                                                                     gATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATGCTGTCGTCGGCctccc             <  1:205555/146‑1 (MQ=255)                                                                                                                                          aCGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATGCTGTCGTCGGCCtcccgctcccgc     >  4:48469/1‑149 (MQ=255)                                                                                                                                          aCGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACAGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATGCTGTCGTCGGCCtcccgctcccgc     >  8:210558/1‑149 (MQ=255)                                                                                                                                           cGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTAc                                                                 >  8:174446/1‑88 (MQ=255)                                                                                                                                           cGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTAc                                                                 >  8:179029/1‑88 (MQ=255)                                                                                                                                           cGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTAc                                                                 <  7:179029/88‑1 (MQ=255)                                                                                                                                           cGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTAc                                                                 <  7:174446/88‑1 (MQ=255)                                                                                                                                           cGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATGCTGTCGTCGGCCTCCCGCTCCcgcg    <  7:256856/149‑1 (MQ=255)                                                                                                                                            ggcacaCCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCCCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATGCTGTCGTCGGCCtcccgctcccgc     >  2:128343‑M2/7‑147 (MQ=255)                                                                                                                                              cacaCCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATGCTGTCGTCGGCCTCCCGCTCCCGCGAg  >  1:244813‑M2/5‑148 (MQ=255)                                                                                                                                                  |                                                                                                                                                 CCCGCGAATGGCCCTCAATCACAACCGCGGATAATCGATGTAACCCACCGGCCCCTTGCCATAGAAGGTTTCGGGATGTGCCTCGTTCAACGGCGCATCCGCTGCCAGCCGTGCCGGCAGGTCGGGGTTGGCGATGAACGGCACACCAAACGCCACGGCATCCGCTTTGCCACTGGCCAGGG‑CCGCATTGGCACTGGCCTTGTCGAACCGCTCGTTGACGATGTACGGGCCACCGAATGCCTCTTTGATCAGCGGCCCGATGCTGTCGTCGGCCTCCCGCTCCCGCGAG  >  NC_002947/1062821‑1063109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.