New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1190854	44 (0.900)	4 (0.090)	4/252	NT	7.9%	coding (376/966 nt)	xcpX	type II secretion system protein K
	?	NC_002947	= 1190882	51 (1.080)					coding (404/966 nt)	xcpX	type II secretion system protein K

TTTGGCGCTGGCCAGGCGCAGTTGCGGGTACGCGACCAGCACACCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGACACCAGCGAGCTGAACCTGTTGCTGGAGCC  >  NC_002947/1190737‑1191026                                                                                                                                                  |                                                                                                                                                  tttGGCGCTGGCCAGGCGCAGTTGCGGGTACGCGACCAGCACACCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGAtgc                                                                                                                                                <  8:160725‑M2/149‑4 (MQ=255) tttGGCGCTGGCCAGGCGCAGTTGCGGGTACGCGACCAGCACACCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGAt                                                                                                                                                  <  8:267221‑M2/147‑2 (MQ=255) tttGGCGCTGGCCAGGCGCAGTTGCGGGTACGCGACCAGCACACCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGAt                                                                                                                                                  >  7:267221‑M2/1‑146 (MQ=255)    ggCGCTGGCCAGGCGCAGTTGCGGGTACGCGACCAGCACACCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGGCGAtgccc                                                                                                                                              >  6:201323‑M2/1‑143 (MQ=255)      cgcTGGCCAGGCGCAGTTGCGGGTACGCGACCAGCACACCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTgg                                                                                                                                           <  1:86896/149‑1 (MQ=255)                gcgcAGTTGCGGGTACGCGACCAGCACACCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCt                                                                                                                                 >  1:68865/1‑149 (MQ=255)                        gCGGGTACGCGACCAGCACACCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGcc                                                                                                                          <  2:68865/148‑1 (MQ=255)                          gggTACGCGACCAGCACACCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGa                                                                                                                        >  1:110136/1‑148 (MQ=255)                           ggTACGCGACCAGCACACCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACa                                                                                                                      <  8:79846/149‑1 (MQ=255)                                  gACCAGCACACCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGc                                                                                                               <  2:110136/149‑1 (MQ=255)                                  gACCAGCACACCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGc                                                                                                               >  5:205138/1‑149 (MQ=255)                                   aCCAGCACACCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGcc                                                                                                              >  3:285827/1‑149 (MQ=255)                                           acCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCa                                                                                                     >  4:32694/1‑149 (MQ=255)                                                    aaCGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGcc                                                                                              >  6:301866/1‑147 (MQ=255)                                                    aaCGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCga                                                                                            <  7:43719/149‑1 (MQ=255)                                                     aCGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTAACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCGCCCTGCAggcgggcat                                                                                            <  1:251470/149‑8 (MQ=255)                                                      cGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCgaga                                                                                          <  7:160725/149‑1 (MQ=255)                                                        tCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAgc                                                                                        >  6:269646/1‑149 (MQ=255)                                                           aTGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGcc                                                                                     <  4:63015/149‑1 (MQ=255)                                                                 tGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTAc                                                                               >  2:30016/1‑149 (MQ=255)                                                                  gCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTAcc                                                                              >  7:130530/1‑149 (MQ=255)                                                                  gCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTAcc                                                                              >  7:126629/1‑149 (MQ=255)                                                                   cTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTAcc                                                                              <  3:32694/148‑1 (MQ=255)                                                                   cTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCt                                                                             <  2:185520/149‑1 (MQ=255)                                                                      ggCGCCGTCGGCGTACGCGCCGATCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGc                                                                           <  6:184184/148‑1 (MQ=255)                                                                      ggCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGc                                                                           <  6:57561/148‑1 (MQ=255)                                                                      ggCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCg                                                                          >  7:196134/1‑149 (MQ=255)                                                                            gACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGc                                                                     >  5:123951/1‑148 (MQ=255)                                                                            gACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGc                                                                     >  2:215316/1‑148 (MQ=255)                                                                            gACGGCGAACACGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAg                                                                      >  4:85825/1‑147 (MQ=255)                                                                            gACGGCGAACACGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAg                                                                      <  3:85825/147‑1 (MQ=255)                                                                               ggCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAAcc                                                                 <  7:84182/149‑1 (MQ=255)                                                                                gCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCg                                                                >  1:196352/1‑149 (MQ=255)                                                                                       cgcCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCa                                                                                   >  2:138860/1‑123 (MQ=255)                                                                                                       cGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGcc                                         >  6:110097/1‑149 (MQ=255)                                                                                                       cGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGc                                          <  4:285827/148‑1 (MQ=255)                                                                                                       cGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGc                                          <  6:205138/148‑1 (MQ=255)                                                                                                        gTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGAtgcccagtaagtaacgcaactggcgctcggcgcgttcgccgtcggcgccgagcaatgcattgacgttgaagcaggtgtgctggtcgcgtacccgcaactgcgcctg                                         <  5:268708‑M2/149‑107 (MQ=255)                                                                                                         ttacttacTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGa                                       >  7:85174/1‑149 (MQ=255)                                                                                                               actGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTc                                  >  8:211927/1‑148 (MQ=255)                                                                                                               actGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTc                                  <  2:196352/148‑1 (MQ=255)                                                                                                                 tGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGa                                >  4:68777/1‑148 (MQ=255)                                                                                                                  gggCAATGACATGGCGGCCGAACGCCTGGTCGAtgcccagtaagtaacgcaactggcgctcggcgcgttcgccgtcggcgccgagcaatgcattgacgttgaagcaggtgtgctggtcgcgtacccgc                                                    <  5:223843‑M2/128‑96 (MQ=255)                                                                                                                  gggCAATGACATGGCGGCCGAACGCCTGGTCGAtgcccagtaagtaacgcaactggcgctcggcgcgttcgccgtcggcgccgagcaatgcattgacgttgaagcaggtgtgctggtcgcgtacccgc                                                    >  6:223843‑M2/1‑33 (MQ=255)                                                                                                                   ggCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCAGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGacac                             >  3:52152/1‑149 (MQ=255)                                                                                                                     cAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGacac                             >  3:251938/1‑147 (MQ=255)                                                                                                                     cAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGacac                             >  7:245144/1‑147 (MQ=255)                                                                                                                       aTGACATGGCGGCCGAACGCCTGGTCGAtgcccagtaagtaacgcaactggcgctcggcgcgttcgccgtcggcgccgagcaatgcattgacgttgaagcaggtgtgctggtcgcgtacccgcaactgcgcctggccagcgccaaagtc                          >  6:268708‑M2/1‑28 (MQ=255)                                                                                                                          aCATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGcc                                                              >  2:247026/1‑109 (MQ=255)                                                                                                                          aCATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGac                               >  2:183504/1‑140 (MQ=255)                                                                                                                          aCATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGac                               <  1:183504/140‑1 (MQ=255)                                                                                                                          aCATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGACACCAGCGa                       <  4:251938/148‑1 (MQ=255)                                                                                                                          aCATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGACACCAGCGAg                      >  1:139248/1‑149 (MQ=255)                                                                                                                          aCATGGAGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGcc                                                              <  1:247026/109‑1 (MQ=255)                                                                                                                            aTGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGaca                              <  7:218900/139‑1 (MQ=255)                                                                                                                            aTGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGaca                              >  8:218900/1‑139 (MQ=255)                                                                                                                                 ggcCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGACACCAGCGAGCTGAAcc               <  1:215316/149‑1 (MQ=255)                                                                                                                                 ggcCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGACACCAGCGAGCTGAAcc               >  6:303560/1‑149 (MQ=255)                                                                                                                                    cGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTTACCAGCCGATGCTCGACACCAGCGAGCTGAACCTGt            <  8:196134/149‑1 (MQ=255)                                                                                                                                       aCGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGACACCAGCGAGCTGAACCTGTTGc         <  3:41909/149‑1 (MQ=255)                                                                                                                                              gTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGACACCAGCGAGCTGAACCTGTTGCTGGAGcc  <  3:68777/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                  TTTGGCGCTGGCCAGGCGCAGTTGCGGGTACGCGACCAGCACACCTGCTTCAACGTCAATGCATTGCTCGGCGCCGACGGCGAACGCGCCGAGCGCCAGTTGCGTTACTTACTGGGCAATGACATGGCGGCCGAACGCCTGGTCGATGCCCTGGCCGACTGGCTTGATGCCGACAGTGATGCCCG‑CCTGCAGGGCGCCGAGAGCGCCCAGTACCTGCGTCAGCAACCGCCACGGCTGGCGGCTGACCAGCCGATGCTCGACACCAGCGAGCTGAACCTGTTGCTGGAGCC  >  NC_002947/1190737‑1191026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.