New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1600146 =	61 (1.250)	4 (0.090)	4/248	NT	7.1%	coding (1038/2292 nt)	bglX	beta‑D‑glucoside glucohydrolase
	?	NC_002947	1600188 =	47 (1.020)					coding (996/2292 nt)	bglX	beta‑D‑glucoside glucohydrolase

CGCGGTGCAGGCGGTCGTTGCCGTAGTAGTCCTTCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGTCACGGGCGACGCCGTGGCGAATCAGCTCCTGGATGGCACCG  >  NC_002947/1600046‑1600335                                                                                                                                               |                                                                                                                                                    cgcgGTGCAGGCGGTCGTTGCCGTAGTAGTCCTTCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTc                                                                                                                                                <  3:257055/148‑1 (MQ=255)    ggTGCAGGCGGTCGTTGCCGTAGTAGTCCTTCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCg                                                                                                                                            <  7:283432/149‑1 (MQ=255)             ggTCGTTGCCGTAGTAGTCCTTCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTcagc                                                                                                                                   <  6:261286/149‑1 (MQ=255)                     ccGTAGTAGTCCTTCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCgg                                                                                                                           <  4:146151/149‑1 (MQ=255)                      cGTAGTAGTCCTTCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGc                                                                                                                          >  7:262826/1‑149 (MQ=255)                      cGTAGTAGTCCTTCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGc                                                                                                                          <  2:270738/149‑1 (MQ=255)                      cGTAGTAGTCCTTCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCACCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCgg                                                                                                                           >  5:228255/1‑148 (MQ=255)                              tCCTTCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTc                                                                                                                  <  1:258096/149‑1 (MQ=255)                               ccTTCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCg                                                                                                                 <  4:180155/149‑1 (MQ=255)                                cTTCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTc                                                                                                                                      <  3:136683/127‑1 (MQ=255)                                cTTCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTc                                                                                                                                      >  4:136683/1‑127 (MQ=255)                                 ttCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGcc                                                                                                               >  4:199908/1‑149 (MQ=255)                                 ttCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGcc                                                                                                               <  7:216603/149‑1 (MQ=255)                                  tCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTc                                                                                                                  <  6:208080/145‑1 (MQ=255)                                  tCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTc                                                                                                                  >  5:208080/1‑145 (MQ=255)                                    aGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGt                                                                                                             <  3:249755/148‑1 (MQ=255)                                      aTCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCg                                                                                                                 >  4:5382/1‑142 (MQ=255)                                      aTCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCg                                                                                                                 <  3:5382/142‑1 (MQ=255)                                       tCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAg                                                                                                         <  5:177288/149‑1 (MQ=255)                                           tttCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCTCCGTACAGGGTa                                                                                                     >  8:51492/1‑149 (MQ=255)                                             tCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCGCATGTCGTACTTGGCACCCAGCACTTCACGCTCCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTAt                                                                                                    <  2:62899/148‑1 (MQ=255)                                               ggCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGt                                                                                                 >  5:166338/1‑149 (MQ=255)                                                  gataccctgtacggcgaagagctgccgggcctgctgaagtccggcgaggtgACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTc                                                                                                                                                     >  6:157221‑M1/52‑94 (MQ=255)                                                  gataccctgtacggcgaagagctgccgggcctgctgaagtccggcgaggtgACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTc                                                                                                                                                     <  5:157221‑M1/43‑1 (MQ=255)                                                            cgcACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGt                                                                                     <  7:164075/148‑1 (MQ=255)                                                                  tACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCa                                                                                              >  6:136073/1‑133 (MQ=255)                                                                  tACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCa                                                                                              <  5:136073/133‑1 (MQ=255)                                                                    cGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCgg                                                                            <  6:166338/149‑1 (MQ=255)                                                                       gTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCt                                                                         <  6:39336/149‑1 (MQ=255)                                                                          cTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGa                                                                      >  5:38880/1‑149 (MQ=255)                                                                           ttGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTca                                                                                                                                     <  1:151639/85‑1 (MQ=255)                                                                           ttGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTca                                                                                                                                     >  2:151639/1‑85 (MQ=255)                                                                             gAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATc                                                                    <  3:199908/148‑1 (MQ=255)                                                                             gAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATc                                                                    <  6:38880/148‑1 (MQ=255)                                                                                 aGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAg                                                               >  2:285734/1‑149 (MQ=255)                                                                                     ccATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGc                                                                                                                          <  1:89620/86‑1 (MQ=255)                                                                                       aTGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTggc                                                         <  8:262826/149‑1 (MQ=255)                                                                                         gTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAgg                                                                                                        <  1:190846/100‑1 (MQ=255)                                                                                         gTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAgg                                                                                                        >  2:190846/1‑100 (MQ=255)                                                                                            gTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCtt                                                    >  3:22586/1‑149 (MQ=255)                                                                                            gTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTAGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGTCCTTGATCGCCAGCTTGGCGGCtt                                                    <  6:16574/149‑1 (MQ=255)                                                                                             tACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCtt                                                    >  8:181087/1‑148 (MQ=255)                                                                                                  ggCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGc                                              >  5:90898/1‑149 (MQ=255)                                                                                                    gacccagcgcgagctggaccaggcggtgcgtgaagtgctgggtCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATc                                                                                                   <  5:157221‑M2/51‑1 (MQ=255)                                                                                                    gacccagcgcgagctggaccaggcggtgcgtgaagtgctgggtCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATc                                                                                                   >  6:157221‑M2/44‑94 (MQ=255)                                                                                                     acccagcgcgagctggaccaggcggtgcgtgaagtgctgggtCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGt                                           >  1:186925‑M2/43‑149 (MQ=255)                                                                                                      CCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGTc                                          >  1:285734‑M1/1‑149 (MQ=255)                                                                                                       ccagcgcgagctggaccaggcggtgcgtgaagtgctgggtCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGTCa                                         >  2:235420‑M2/41‑149 (MQ=255)                                                                                                                         ccTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGTCACGGGCGACGCCg                             <  5:213581/143‑1 (MQ=255)                                                                                                                         ccTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGTCACGGGCGACGCCGTGGCg                        >  1:205942/1‑148 (MQ=255)                                                                                                                         ccTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGTAACGGGCGACGCCg                             >  6:213581/1‑143 (MQ=255)                                                                                                                          cTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGTCACGGGCGACGCCGTGGCGaa                      >  8:64699/1‑149 (MQ=255)                                                                                                                              tCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGTCACGGGCGACGCCGTGGCGAATCAg                  >  3:259886/1‑149 (MQ=255)                                                                                                                                cAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGTCACGGGCGACGCCGTGGCGAATCAGc                 <  7:181087/148‑1 (MQ=255)                                                                                                                                      gcgcTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGTCACGGGCGACGCCGTGGCGAATCAGCTCCTgg           <  2:49683/148‑1 (MQ=255)                                                                                                                                      gcgcTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGTCACGGGCGACGCCGTGGCGAATCAGCTCCTgg           >  1:49683/1‑148 (MQ=255)                                                                                                                                        gctgggtCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGTCACGGGCGACGCCGTGGCGAATCAGCTCCTGGATg        <  4:259886‑M2/142‑1 (MQ=255)                                                                                                                                              tCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGTCACGGGCGACGCCGTGGCGAATCAGCTCCTGGATGGCACCg  <  7:51492‑M2/148‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                    CGCGGTGCAGGCGGTCGTTGCCGTAGTAGTCCTTCAGATCGGTTTCGGCCTTGCCGATGCGCACGTACGGGTCCTTGAACAGGCCCATGTCGTACTTGGCACCCAGCACTTCACGCACCGCCTGGTCCAGCTCGCGCTGGGTCACCTCGCCGGACTTCAGCAGGCCCGGCAGCTCTTCGCCGTACAGGGTATCGTTCATGCTCATGTCGATGCCGGCCTTGATCGCCAGCTTGGCGGCTTCACGGCCGTCACGGGCGACGCCGTGGCGAATCAGCTCCTGGATGGCACCG  >  NC_002947/1600046‑1600335

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.