New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1600461	55 (1.120)	5 (0.110)	5/252	NT	9.0%	coding (723/2292 nt)	bglX	beta‑D‑glucoside glucohydrolase
	?	NC_002947	= 1600481	48 (1.020)					coding (703/2292 nt)	bglX	beta‑D‑glucoside glucohydrolase

TGATGGTCACGCCCTTGAAGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGCTTGACGATGGCCATGATGCTGTCGGGGTTGGCCGGGCT  >  NC_002947/1600343‑1600613                                                                                                                                           |                                                                                                                                     tGATGGTCACGCCCTTGAAGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCa                                                                                                                              >  8:232688/1‑147 (MQ=255) tGATGGTCACGCCCTTGAAGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCa                                                                                                                              <  7:232688/147‑1 (MQ=255) tGATGGTCACGCCCTTGAAGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAgg                                                                                                                            >  8:57783/1‑149 (MQ=255)   aTGGTCACGCCCTTGAAGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAgg                                                                                                                            <  6:104918/147‑1 (MQ=255)      gTCACGCCCTTGAAGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTc                                                                                                                       <  7:70493/149‑1 (MQ=255)      gTCACGCCCTTGAAGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTc                                                                                                                       >  3:150434/1‑149 (MQ=255)        cACGCCCTTGAAGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGt                                                                                                                           >  1:173608/1‑143 (MQ=255)        cACGCCCTTGAAGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGt                                                                                                                           <  2:173608/143‑1 (MQ=255)        cACGCCCTTGAAGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGt                                                                                                                     >  3:53717/1‑149 (MQ=255)         aCGCCCTTGAAGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAg                                                                                                                             >  6:48948/1‑140 (MQ=255)         aCGCCCTTGAAGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAg                                                                                                                             <  5:48948/140‑1 (MQ=255)                  aaGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACAtttt                                                                                                           >  5:244884/1‑149 (MQ=255)                   aGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTc                                                                                                          <  7:57783/149‑1 (MQ=255)                    gCCCCACGCCTTGCGCAGCAGGTCGTTCATCAGCCCGGTGTTGGAGGTGGCCGGTACGCCGGTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCg                                                                                                         <  4:225643/149‑1 (MQ=255)                      cccACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCgg                                                                                                        >  7:129342/1‑148 (MQ=255)                       ccACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTAc                                                                                                                <  3:134576/139‑1 (MQ=255)                       ccACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTAc                                                                                                                >  4:134576/1‑139 (MQ=255)                          cTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGc                                                                                                   <  8:129342/149‑1 (MQ=255)                                     gcagGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTc                                                                                                          <  8:116976/131‑1 (MQ=255)                                     gcagGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTc                                                                                                          >  7:116976/1‑131 (MQ=255)                                            gTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGtgttg                                                                                  >  1:305780/1‑148 (MQ=255)                                                 tcaGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTcg                                                                            >  7:169274/1‑149 (MQ=255)                                                   aGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTcgc                                                                           <  6:244884/148‑1 (MQ=255)                                                     ccAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTc                                                                                                                       <  6:84125/102‑1 (MQ=255)                                                     ccAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTc                                                                                                                       >  5:84125/1‑102 (MQ=255)                                                     ccAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGcgcc                                                                        >  1:157377/1‑149 (MQ=255)                                                      cAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGcgccc                                                                       >  1:56910/1‑149 (MQ=255)                                                           gtTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGtgtt                                                                                   >  5:58182/1‑132 (MQ=255)                                                           gtTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGtgtt                                                                                   <  6:58182/132‑1 (MQ=255)                                                                    ggCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGgcgc                                                         >  4:139257/1‑149 (MQ=255)                                                                     gCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCAAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGgc                                                           <  2:245302/146‑1 (MQ=255)                                                                     gCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCAAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGgc                                                           >  1:245302/1‑146 (MQ=255)                                                                      ccGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCAACGGCGCCa                                                       >  6:298255/1‑149 (MQ=255)                                                                            cGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACaa                                                  <  2:305780/148‑1 (MQ=255)                                                                            cGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAg                                                 <  4:53717/149‑1 (MQ=255)                                                                             gCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTc                                                                 >  2:303614/1‑132 (MQ=255)                                                                             gCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTc                                                                 <  1:303614/132‑1 (MQ=255)                                                                                   gATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGaaa                                           <  2:56910/148‑1 (MQ=255)                                                                                    aTCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAg                                                                                                     >  8:25139/1‑89 (MQ=255)                                                                                    aTCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAg                                                                                                     <  7:25139/89‑1 (MQ=255)                                                                                     tCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGc                                        >  6:199531/1‑149 (MQ=255)                                                                                     tCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGc                                        <  3:139257/149‑1 (MQ=255)                                                                                       gAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGCt                                       <  5:74949/148‑1 (MQ=255)                                                                                             aGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGCTTGACGa                                 <  2:157377/148‑1 (MQ=255)                                                                                             aGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGCTTGACGAt                                <  4:150434/149‑1 (MQ=255)                                                                                             aGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGCTTGACGAt                                <  5:199531/149‑1 (MQ=255)                                                                                               cgcCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGCTTGACGATgg                              <  3:283690/149‑1 (MQ=255)                                                                                                   accaTCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGCTTGACGATGGCCat                          >  1:299962/1‑149 (MQ=255)                                                                                                     caTCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGCTTGACGATGGCCatga                        >  4:171713/1‑149 (MQ=255)                                                                                                        cACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACGTTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGCTTGACGATGGCCATGATGc                     >  1:120399/1‑149 (MQ=255)                                                                                                               ccGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGCTTGACGATGGCCATGATGCTGTCggg              <  3:171713/149‑1 (MQ=255)                                                                                                                cGGCACCCGCATCGAGCGCGGCGCGATAgggtgccggtggcgtgatggtggcgctgaactcgatcaacggcgtaccggccacctccaacacctggctgatgaacgacctgctgcgcaaggagtggggcttcaag                            <  5:275239‑M2/134‑107 (MQ=255)                                                                                                                cGGCACCCGCAGCGAGCGCGGCGCGATAgggtgccggtggcgtgatggtggcgctgaactcgatcaacggcgtaccggccacctccaacacctggctgatgaacgacctgctgcgcaaggagtggggcttcaag                            >  6:275239‑M2/1‑28 (MQ=255)                                                                                                                  gCACCCGCATCGAGCGCGGCGCGATAgggtgccggtggcgtgatggtggcgctgaactcgatcaacggcgtaccggccacctccaacacctggctgatgaacgacctgctgcgcaaggagtggg                                    >  2:166418‑M2/1‑26 (MQ=255)                                                                                                                  gCACCCGCATCGAGCGCGGCGCGATAgggtgccggtggcgtgatggtggcgctgaactcgatcaacggcgtaccggccacctccaacacctggctgatgaacgacctgctgcgcaaggagtggg                                    <  1:166418‑M2/124‑99 (MQ=255)                                                                                                                  gCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGCTTGACGATGGCCATGATGCTGTCGGGGtt           <  2:299962/149‑1 (MQ=255)                                                                                                                      ccGCATCGAGCGCGGCGCGATAgggtgccggtggcgtgatggtggcgctgaactcgatcaacggcgtaccggccacctccaacacctggctgatgaacgacctgctgcgcaaggagtggggcttcaagggcgtgaccatcagcgaccac       <  8:38152‑M2/149‑128 (MQ=255)                                                                                                                      ccGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGCTTGACGATGGCCATGATGCTGTCGGGGTTGGcc       >  1:49215/1‑149 (MQ=255)                                                                                                                           tCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGCTTGACGATGGCCATGATGCTGTCGGGGTTGGCCGGgct  >  1:1545/1‑149 (MQ=255)                                                                                                                                           |                                                                                                                                     TGATGGTCACGCCCTTGAAGCCCCACTCCTTGCGCAGCAGGTCGTTCATCAGCCAGGTGTTGGAGGTGGCCGGTACGCCGTTGATCGAGTTCAGCGCCACCATCACGCCACCGGCACCCGCATCGAGCGCGGCGCGATAGGGTGGCAGGTAGTCGTTGTACATTTTCGGCAGGCTCATATCGACCGTGTTGTAGTCGCGCCCGCCTTCCACGGCGCCATACAAGGCGAAATGCTTGACGATGGCCATGATGCTGTCGGGGTTGGCCGGGCT  >  NC_002947/1600343‑1600613

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.