New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1784357 =	39 (0.800)	4 (0.090)	4/248	NT	9.9%	coding (544/783 nt)	map	methionine aminopeptidase
	?	NC_002947	1784402 =	36 (0.780)					coding (499/783 nt)	map	methionine aminopeptidase

CTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGATGGTGAAGGTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACATGCATTCCTGGGTGACCTTGGACAGGCGCTCGGCCCAGACCGGC  >  NC_002947/1784259‑1784550                                                                                                                                                |                                                                                                                                                     ggccatcgagctggtcaagccgggctgccgcctgggcgacatcggtgaagtgatccagaagcacgcggaaaagaacggtttctcggtggtacgcgagtTCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTcgc                                                                                                                                                 >  2:155670‑M1/99‑149 (MQ=255) cTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGATGGTGAAGGTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTcgc                                                                                                                                                 <  6:159803/149‑1 (MQ=255)    catcgagctggtcaagccgggctgccgcctgggcgacatcggtgaagtgatccagaagcacgcggaaaagaacggtttctcggtggtacgcgagtTCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTc                                                                                                                                                   <  1:236432‑M1/49‑1 (MQ=255)    catcgagctggtcaagccgggctgccgcctgggcgacatcggtgaagtgatccagaagcacgcggaaaagaacggtttctcggtggtacgcgagtTCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTc                                                                                                                                                   >  2:236432‑M1/96‑144 (MQ=255)       gtCGGCCTTGCCCTGGTTGATCATCGGCTCGATGGTGAAGGTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTacca                                                                                                                                           >  2:263097/1‑149 (MQ=255)           gCCTTGCCCTGGTTGATCATCGGCTCGATGGTGAAGGTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCga                                                                                                                                       <  2:51968/149‑1 (MQ=255)                gCCCTGGTTGATCATCGGCTCGATGGTGAAGGTCATGCCTTCCTTCACCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGaaa                                                                                                                                   <  1:263097/148‑1 (MQ=255)                      gTTGATCATCGGCTCGATGGTGAAGGTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTc                                                                                                                             <  3:86936/148‑1 (MQ=255)                          atcatcGGCTCGATGGTGAAGGTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTc                                                                                                                        <  6:261264/149‑1 (MQ=255)                           tcatcGGCTCGATGGTGAAGGTCCTGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTcc                                                                                                                       >  6:84697/1‑149 (MQ=255)                           tcatcGGCTCGATGGTGAAGGTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGTGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTcc                                                                                                                       >  2:1554/1‑149 (MQ=255)                           tcatcGGCTCGATGGTGAAGGTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTcc                                                                                                                       >  3:290222/1‑149 (MQ=255)                            catcGGCTCGATGGTGAAGGTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCcg                                                                                                                      >  4:95614/1‑149 (MQ=255)                              tcGGCTCGATGGTGAAGGTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCcgcg                                                                                                                    >  2:292918/1‑149 (MQ=255)                                       tGGTGAAGGTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTgg                                                                                                           <  1:14800/149‑1 (MQ=255)                                          tGAAGGTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGAt                                                                                                         >  1:300879/1‑148 (MQ=255)                                          tGAAGGTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATc                                                                                                        <  5:14430/149‑1 (MQ=255)                                              ggTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACtt                                                                                                    >  4:168712/1‑149 (MQ=255)                                                tCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCa                                                                                                  >  6:40647/1‑149 (MQ=255)                                                    gCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGa                                                                                              >  6:137246/1‑149 (MQ=255)                                                      cttccttcAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTc                                                                                                   >  2:46827/1‑142 (MQ=255)                                                      cttccttcAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTc                                                                                                   <  1:46827/142‑1 (MQ=255)                                                           ttcAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGcc                                                                                       >  7:15564/1‑149 (MQ=255)                                                              aGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAg                                                                                    <  8:15564/149‑1 (MQ=255)                                                                 tCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAggcg                                                                                 >  4:156074/1‑149 (MQ=255)                                                                   cATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAggcggc                                                                               <  3:156074/149‑1 (MQ=255)                                                                    aTGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCa                                                                              >  2:295385/1‑149 (MQ=255)                                                                               aGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGa                                                                   <  1:292918/149‑1 (MQ=255)                                                                                      ccATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTc                                                            >  6:8399/1‑149 (MQ=255)                                                                                             gcgagttctgcggtcatggcatcggcaaggtgttccacgaagagccgcagaACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGcc                                                     >  2:155670‑M2/52‑149 (MQ=255)                                                                                              gaggaTCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGcc                                                     <  1:295385/148‑1 (MQ=255)                                                                                              gaggaTCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCt                                                    >  8:80272/1‑149 (MQ=255)                                                                                               gagttctgcggtcatggcatcggcaaggtgttccacgaagagccgcagaACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATg                                                        >  2:236432‑M2/50‑144 (MQ=255)                                                                                               gagttctgcggtcatggcatcggcaaggtgttccacgaagagccgcagaACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATg                                                        <  1:236432‑M2/95‑1 (MQ=255)                                                                                                ggaTCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTg                                                  <  3:168712/149‑1 (MQ=255)                                                                                                 gaTCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACAAGCTCGATGGCCTTg                                                  >  5:9652/1‑148 (MQ=255)                                                                                                    CTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACa                                              <  2:77663‑M1/149‑1 (MQ=255)                                                                                                      GCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACATg                                            <  4:298359‑M1/149‑1 (MQ=255)                                                                                                       CGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACa                                              >  4:290222‑M1/1‑146 (MQ=255)                                                                                                       CGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACAt                                             >  2:300879‑M1/1‑147 (MQ=255)                                                                                                         GCTCTTCGTGTAACACCTTGCCGATGCCTTGACCGCAGAAATCGCGTACCACCGAGAAACCGTTCTTTTCCGCTTGCTTCTGGATCACTTCACCGAt                                                                                             >  4:117287‑M1/1‑97 (MQ=255)                                                                                                               gcatcggcaaggtgttccacgaagagccgcagaACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACATGCATTCCTgg                                   <  1:155670‑M2/116‑1 (MQ=255)                                                                                                                gTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACATGCATTCCTgg                                   <  5:137246/148‑1 (MQ=255)                                                                                                                 tGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACATGCATTCCTGGGt                                 >  3:72083/1‑149 (MQ=255)                                                                                                                 tGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACATGCATTCCTGGGt                                 >  1:146625/1‑149 (MQ=255)                                                                                                                        ccTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACATGCATTCCTGGGTGACCTTg                          <  4:72083/149‑1 (MQ=255)                                                                                                                             ccGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACATGCATTCCTGGGTGACCTTGGACa                      <  2:146625/148‑1 (MQ=255)                                                                                                                                aTGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACATGCATTCCTGGGTGACCTTGGACAGgcg                  >  1:117905/1‑149 (MQ=255)                                                                                                                                    cATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACATGCATTCCTGGGTGACCTTGGACAGGCGCTCg              >  3:278260/1‑149 (MQ=255)                                                                                                                                         ccgcagaACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACATGCATTCCTGGGTGACCTTGGACAGGCGCTCGGCCCa         <  1:1554‑M2/142‑1 (MQ=255)                                                                                                                                            cagaACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACATGCATTCCTGGGTGACCTTGGACAGGCGCTCGGCCCAGAc      <  5:8399‑M2/145‑1 (MQ=255)                                                                                                                                                aCTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACATGCATTCCTGGGTGACCTTGGACAGGCGCTCGGCCCAGACCGGc  <  5:40647/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                     CTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGATGGTGAAGGTCATGCCTTCCTTCAGCTCCATGCCCGTGCCAGCGCGGCCATAGTGGAGGATCTGCGGCTCTTCGTGGAACACCTTGCCGATGCCATGACCGCAGAACTCGCGTACCACCGAGAAACCGTTCTTTTCCGCGTGCTTCTGGATCACTTCACCGATGTCGCCCAGGCGGCAGCCCGGCTTGACCAGCTCGATGGCCTTGTACATGCATTCCTGGGTGACCTTGGACAGGCGCTCGGCCCAGACCGGC  >  NC_002947/1784259‑1784550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.