| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3588116 | 34 (0.690) | 4 (0.100) | 4/222 | NT | 11.6% | intergenic (+37/‑38) | catA‑II/benE‑II | catechol 1,2‑dioxygenase/benzoate transport protein |
| ? | NC_002947 | = 3588144 | 32 (0.770) | intergenic (+65/‑10) | catA‑II/benE‑II | catechol 1,2‑dioxygenase/benzoate transport protein | |||||
AGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACG > NC_002947/3587997‑3588288 | aGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTg > 1:128657‑M2/1‑148 (MQ=255)aGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTg > 8:143725‑M2/1‑148 (MQ=255) aCTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCTCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTggagcgg > 7:279795‑M2/1‑142 (MQ=255) cTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTggagcggg < 1:64283‑M2/149‑9 (MQ=255) cAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTggagcgggcatg > 4:66065‑M2/1‑137 (MQ=255) cAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTggagcgggcatg < 7:159708‑M2/149‑13 (MQ=255) cAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTggagcgggcatg > 5:216770‑M2/1‑137 (MQ=255) ttGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTggagcgggcatgccc < 2:43019‑M2/149‑16 (MQ=255) cagGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTggagcgggcatgcccgcga < 1:216009‑M2/147‑20 (MQ=255) cagGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTggagcgggcatgcccgcga > 2:216009‑M2/1‑128 (MQ=255) ccAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTggagcggg > 4:182377‑M2/1‑123 (MQ=255) gCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGAACCACCGAGGGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTTAAGCCTGTGCAGTCGTTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAacac < 2:261927/149‑1 (MQ=255) ccGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAAc < 8:159708/149‑1 (MQ=255) gATGAGCAGCGCAGCGGGCGGCCGCTAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAaca < 6:237985/140‑1 (MQ=255) gATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAaca > 5:237985/1‑140 (MQ=255) gcagcgcagcGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGCAGCAGCCAACACCCAAACAAGAGcc > 1:131709/1‑149 (MQ=255) cgcagcgGCCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGGGGGCTGTTTCGCGGGCAGGCCCGCTCCCACAGGGGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGcc < 4:58337/149‑1 (MQ=255) gcgggcggCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGCAGCAGCCAACACCCAAACAAGAGCCCGCcaca > 7:206647/1‑148 (MQ=255) gggcggCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAg < 7:137685/149‑1 (MQ=255) gccggtaGCTTTGCTGGTGGCCTTATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCTGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAggccgg < 2:131709/143‑1 (MQ=255) gcCGCGAGGTTTGCAGGTGGCCTGATCCACCCAGGGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCATTCGTTGTTGGAGCGGGCATGCCCGCGAAGCATCCAAAACCCAAACAAGAGCCCGCCACAAAggccgg < 8:177618/149‑1 (MQ=255) tttGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTACCACAGGTGAAGCCCGTGCAGTCGTTGTTGGAGCCGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAACGCCCGCCCCAGcca > 8:45148/1‑148 (MQ=255) tGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGCAGCAGCCCACCCCCAAACAAGCGCCCCCCCCAAAGGCCCGCCCCGGccggg > 8:265593/1‑146 (MQ=255) gcatgcggCCTGATCCACCGCGTGGGCTGTTTCGCGGGCATGCCCGCACCCACAGGTTAAGCCTGTGCAGTCGTTGTTGGAGCGGGAATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTg < 8:206647/142‑1 (MQ=255) gCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTg < 7:260429/148‑1 (MQ=255) gCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTg < 2:64283/148‑1 (MQ=255) cAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGc < 1:43019/148‑1 (MQ=255) gaggCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCgaga < 7:265593/149‑1 (MQ=255) ccTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCt > 5:293980/1‑149 (MQ=255) tGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCtt > 8:3727/1‑148 (MQ=255) aTCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCCGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTc < 7:45148/147‑1 (MQ=255) tGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAACCGCTGATc > 1:43010/1‑147 (MQ=255) gcgGGCATGCCCGATCCCACAGGTGAAGACTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCACCCCCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGAGAGAAGCTTCATGAAAACGCTGAACAAGGACTg > 7:130517/1‑149 (MQ=255) gattgccCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTggagcgggcatgtccgcgaaacagcccactcggtggatcaggcctcctgcaaagctcgcggccgcccgctgcgctgctcatcggcaccgccctgggcctgctgcaact > 1:305147‑M2/4‑41 (MQ=255) gCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGctct < 6:293980/149‑1 (MQ=255) cATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTggagcgggcatgcccgcgaaacagcccactcggtggatcaggcctcctgcaaagctcgcggccgcccgctgcgctgctcatcggcaccgccctgggcctgctgcaactg < 2:276301‑M2/149‑110 (MQ=255) tGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTggagcgggcatgcccgcgaaacagcccactcggtggatcaggcctcctgcaaagctcgcggcc > 5:25545‑M2/1‑38 (MQ=255) tGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTggagcgggcatgcccgcgaaacagcccactcggtggatcaggcctcctgcaaagctcgcggcc < 6:25545‑M2/101‑64 (MQ=255) cGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCgg > 2:175656/1‑149 (MQ=255) gAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCgg > 5:281326/1‑149 (MQ=255) aGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGGGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGc < 1:11056/135‑1 (MQ=255) aGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGGGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGc < 1:15837/135‑1 (MQ=255) aGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGGGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGc > 2:15837/1‑135 (MQ=255) aGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGGGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGc > 2:11056/1‑135 (MQ=255) tCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCAtcgtc > 3:295848/1‑131 (MQ=255) tCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCAtcgtc < 4:295848/131‑1 (MQ=255) gttgttGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCacgac > 8:84352/1‑149 (MQ=255) ttgttgGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAACCGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCacgacg < 2:43010/149‑1 (MQ=255) gttgGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAg < 2:43706/102‑1 (MQ=255) gttgGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAg > 1:43706/1‑102 (MQ=255) | AGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCCACAGGTGAAGCCTGTGCAGTCGTTGTTGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACG > NC_002947/3587997‑3588288 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |