New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3649219 = | 50 (1.020) | 4 (0.090) | 4/246 | NT | 8.3% | intergenic (+696/+995) | PP_3214/PP_3216 | hypothetical protein/cysteine dioxygenase |
? | NC_002947 | 3649263 = | 41 (0.890) | intergenic (+740/+951) | PP_3214/PP_3216 | hypothetical protein/cysteine dioxygenase |
GTCCAGCACTACTGTGCCGTCTTCCTGCAGCCAGCTGGCCAGTTGCTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGG > NC_002947/3649115‑3649408 | gTCCAGCACTACTGTGCCGTCTTCCTGCAGCCAGCTGGCCAGTTGCTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCt < 3:171832/149‑1 (MQ=255) accgaccacgtcgccagtgtgcgcggggcgcgcatcgcgctggtggacgacgatggcgtgcgcgccaacatgagcgcctcgtggctggcacagatgggctggcaGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCt > 5:260028‑M1/105‑149 (MQ=255) ccgaccacgtcgccagtgtgcgcggggcgcgcatcgcgctggtggacgacgatggcgtgcgcgccaacatgagcgcctcgtggctggcacagatgggctggcaGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTg > 6:311047‑M1/104‑149 (MQ=255) tactGTGCCGTCTTCCTGCAGCCAGCTGGCCAGTTGCTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCa > 8:77876/1‑149 (MQ=255) ctGTGCCGTCTTCCTGCAGCCAGCTGGCCAGTTGCTCGACGGTTATTTCGCTTGCATCCGGCAATTCGTGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCTACCTGCCAGCCCAt < 8:67011/148‑1 (MQ=255) ctGTGCCGTCTTCCTGCAGCCAGCTGGCCAGTTGCTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATc < 6:6466/149‑1 (MQ=255) gCCGTCTTCCTGCAGCCAGCTGGCCAGTTGCTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCtgt < 1:299403/148‑1 (MQ=255) gCCGTCTTCCTGCAGCCAGCTGGCCAGTTGCTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCtgt > 2:299403/1‑148 (MQ=255) ccGTCTTCCTGCAGCCAGCTGGCCAGTTGCTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTgc > 2:211628/1‑149 (MQ=255) ccGTCTTCCTGCAGCCAGCTGGCCAGTTGCTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTgc > 3:160893/1‑149 (MQ=255) ccTGCAGCCAGCTGGCCAGTTGCTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTgccagcca < 1:211628/148‑1 (MQ=255) cagcgagcTGGCCAGTGGCTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAgg < 8:45172/149‑1 (MQ=255) gccagcTGGCCAGTTGCTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGACCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGgcg > 7:137434/1‑149 (MQ=255) ggCCAGTTGCTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGt > 6:145286/1‑149 (MQ=255) gCCAGTTGCTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATg < 6:248284/147‑1 (MQ=255) cTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGATGACATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCa > 1:218338/1‑149 (MQ=255) tCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGa > 4:275758/1‑128 (MQ=255) tCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGa < 3:275758/128‑1 (MQ=255) tCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCAc > 2:207991/1‑149 (MQ=255) tCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCAc > 2:119840/1‑149 (MQ=255) gACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGc < 5:145286/149‑1 (MQ=255) ggTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCAt > 4:115068/1‑149 (MQ=255) tttCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCAtcgtcg < 6:230745/149‑1 (MQ=255) tGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGTAGCTCACGCCATCGTCGTccac > 4:41024/1‑148 (MQ=255) cATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAgc < 4:160893/149‑1 (MQ=255) tCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTccac > 1:297996/1‑143 (MQ=255) tCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTccac < 2:297996/143‑1 (MQ=255) aaTTCGGCCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCCTCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATgcg > 1:136202/1‑149 (MQ=255) cAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCcgc < 5:286765/149‑1 (MQ=255) gTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTg < 1:119840/149‑1 (MQ=255) tGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGc < 5:304389/149‑1 (MQ=255) gCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCTCCCCGCGCACACTg < 6:68332/146‑1 (MQ=255) gCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTg > 5:68332/1‑146 (MQ=255) aTTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACg < 3:115068/149‑1 (MQ=255) ttCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGt < 2:209014/149‑1 (MQ=255) caggtcgctgtggtcgacgggctgactgcagcggacttcagcgaccTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTggtcgg > 6:311047‑M2/47‑149 (MQ=255) aggtcgctgtggtcgacgggctgactgcagcggacttcagcgaccTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTggtcggt > 5:260028‑M2/46‑149 (MQ=255) gtcgctgtggtcgacgggctgactgcagcggacttcagcgaccTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGtct > 8:87014‑M2/44‑149 (MQ=255) GTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGCCCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCCCCAGCCCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGtct < 2:278101‑M1/149‑1 (MQ=255) GTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGtct < 6:13477‑M1/149‑1 (MQ=255) gctgtggtcgacgggctgactgcagcggacttcagcgaccTGCCAGCCCATCCGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTctct < 5:311047‑M2/108‑1 (MQ=255) TGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTg < 8:220022‑M1/148‑1 (MQ=255) TGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCACTCATGTTGGCGCGCACGCCATCTTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTg < 7:82371‑M1/148‑1 (MQ=255) aaGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGaa < 3:41024/148‑1 (MQ=255) aaGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGa < 7:77876/147‑1 (MQ=255) aaGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAAc < 3:102377/149‑1 (MQ=255) cGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGtt > 3:216890/1‑149 (MQ=255) cAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTctct > 4:106157/1‑134 (MQ=255) cAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTctct < 3:106157/134‑1 (MQ=255) tCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCccgccg > 5:185157/1‑149 (MQ=255) aGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCggg > 5:22553/1‑149 (MQ=255) gTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCg > 5:141498/1‑149 (MQ=255) gACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCggg < 2:218338/148‑1 (MQ=255) gACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGggc < 8:137434/149‑1 (MQ=255) cttcagcgaccTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGggcgg < 7:87014‑M2/138‑1 (MQ=255) ccACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGggcgg < 5:13477/149‑1 (MQ=255) gcgaccTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCTCCGGGCACCGGGCGGCTGcc < 6:22553‑M2/143‑1 (MQ=255) gaccTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCg < 6:260028‑M2/145‑1 (MQ=255) cTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCgg > 8:184294‑M2/2‑147 (MQ=255) | GTCCAGCACTACTGTGCCGTCTTCCTGCAGCCAGCTGGCCAGTTGCTCGACGGTTATTTCGCTGGCATCCGGCAATTCGGGCAGCGGCGGTTGCCATTCGCCCCGGTCGCTGAAGTCCGCTGCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGG > NC_002947/3649115‑3649408 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |